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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome … software, compute, and AI for large-scale genomics and lab informatics. Prior to joining JGI in late 2025, he … core software engineer on the early KBase team at Lawrence Berkeley National Laboratory. Mike earned his PhD in …
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Partners
… others providing complementary expertise to advance the science and serve as impact multipliers . The JGI has a … Knowledgebase (KBase) and the National Microbiome Data Collaborative (NMDC)—to provide access to datasets, workflows, … through the Facilities Integrating Collaborations for User Science (FICUS) program.     …
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FICUS-NERSC/KBASE
… is to accelerate scientific discovery at the DOE Office of Science through high performance computing (HPC) and data … missions, and to expand upon highly successful past collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in biological data science as part of the FICUS initiative. Proposals submitted …
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CSP Large Scale Call
… The Community Science Program Large Scale call is focused on genomic science projects that address biological functions for … the JGI’s sample requirements . Samples that are not available in a timely manner will delay processing, while … Programs. Technical and Scientific Leads will also be available to answer any questions prior to proposal submission.   …
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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), to help drive discoveries that … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… DOE Joint Genome Institute and the Environmental Molecular Sciences Laboratory hosted a webinar to showcase how researchers can … FICUS Program” Sabeeha Merchant , University of California, Berkeley: “Cu economy and luxury in Chlamydomonas ”   … the day before the deadline to ask questions. Make sure the science is relevant to the DOE BER mission. …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… omics methods to examine microbial chemical production. The Science Soil bacteria in the genus Streptomyces are nature's … most of these gene clusters remain silent under standard laboratory conditions. Researchers with the Department of … (JGI), a DOE Office of Science user facility located at Berkeley Lab, screened dozens of growth conditions and found …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… genetic toolkit of ancestral and present-day plants The Science In a recent  Nature Genetics paper , researchers … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory through the Community Science Program . The … Institute ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported by the Office of Science …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. Most species are … team, which included scientists from Oak Ridge National Laboratory and the U.S. Department of Energy (DOE) Joint … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory. The JGI sequenced the shrub …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… bacteria function and colonize diverse environments. The Science Cyclic di-GMP (Guanine Monophosphate) is found in … in bacteria through work enabled by the JGI’s Community Science Program (CSP) . The Impact Cyclic di-GMP controls … approach, researchers at the University of California, Berkeley and the Joint Genome Institute, a DOE Office of …
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DAS Tool for Genome Reconstruction from Metagenomes
… approach to genome recovery from metagenomes. The Science Through the JGI’s Emerging Technologies Opportunity … cycling to plant health and growth. Developing a scalable computational approach that provides researchers with … collaborator Jill Banfield of the University of California, Berkeley and involving JGI researchers, reported on the …
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Mapping Heat Resistance in Yeasts
… for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, researchers … (JGI), a DOE Office of Science User Facility of Lawrence Berkeley National Laboratory, aim to improve our understanding of fungal … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science …
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