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… increased the number of known high quality virophage genome sequences 10-fold through computational approaches. By mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which includes  IMG/VR (for Virus)—for the virophage marker gene MCP, they were able …

For the Joint Genome Institute, the end of 2018 was marked … over one “petabase” – a quadrillion nucleotide bases of DNA sequence to the public data repositories over its now 20-plus-year history. In …

… the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental Protection … and 2010. DNA was extracted from the samples that were sequenced by the U.S. Department of Energy (DOE) Joint … , they were able to analyze the resulting metagenomic data. (Data from the project are available on the  JGI …

… to the proposers of the 19 proposals selected for the 2023 Community Science Program call of the U.S. Department of … questions relevant to the DOE mission, and we look forward to facilitating their success. “ The CSP Annual Call …

… in the Analysis R&D group focuses on developing new bioinformatics solutions to support JGI in adopting new genomics … scaling up genomics analysis to peta-bases, and enabling data-driven science. This is a group of computational … metagenome and metatranscriptome assembly, Hadoop based on sequence analysis framework, etc. For example, this group …

… is characteristic of the sex chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in … first time, the sex chromosomes of shrub willow have been sequenced with sufficient resolution to analyze their … Science Foundation of China (31590821, 31561123001, 31500502, 41871044), National Key Research and Development Program …

… projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and integrating mathematics and chemistry for advanced analysis, modeling, and data integration. Dr. Bowen’s expertise in spectral … U., Cadillo-Quiroz, H., Garcia-Pichel, F., & others (2015). Exometabolite niche partitioning among sympatric soil …

… research focuses on leveraging thousands of metagenomic datasets from host-associated and environmental samples to identify and characterize genomic information from uncultivated microbes and viruses. Prior to … Earth’s microbiomes. Biotechnol . doi: 10.1038/s41587-020-0718-6. Wood-Charlson EM, et al. 2020. The National …

The PhycoCosm data portal allows anyone to freely investigate the genes of … Understanding the genetic underpinnings responsible for these traits takes us closer to harnessing algae for … algal genomes can be incredibly complex and difficult to sequence and understand. A team of researchers led by Algal …

… he served as a Research Molecular Biologist at the USDA for 12 years where he was a driving force behind the … on developing plant functional genomic resources (e.g. sequenced mutant collections, transformation technology, … Science, Department of Plant Biology … Scarlett, et. al. 2023 Multiple origins, one evolutionary trajectory: gradual …