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Identifying the Microbial Cleanup Crew at a Superfund Site
… areas that require cleanup and long-term monitoring. The DOE has been similarly invested in environmental management, … was at contamination levels that are below the minimum amount of what’s allowed in drinking water. However, in the … to analyze the resulting metagenomic data. (Data from the project are available on the  JGI Genome Portal .) The team …
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A Complex Confection Decoded: Sugarcane Reference Genome
Sugarcane was the last major crop without a reference quality genome and now crop researchers … Development (CIRAD), and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … of Experimental Botany (IEB) was supported by the ERDF project “Plants as a Tool for Sustainable Global …
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Igor Grigoriev
Dr. Grigoriev joined the DOE Joint Genome Institute in 2003, following his … of California, Berkeley. He contributed to the Human Genome Project and led annotation and analysis of diverse … Selaginella Genome Identifies Genetic Changes Associated with the Evolution of Vascular Plants.  Science, 2011; 332: …
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David Goodstein
With a background in experimental and computational surface … gene models in support of JGI’s contributions to the Human Genome Project, he began developing larger comparative genomic …
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The Physcomitrella patens gene atlas project: large‐scale RNA‐seq based expression data
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Microbiome Data Science Team
The exponential growth of DNA sequencing data, coupled with recent computational technology advances in management, … learning approaches in data analysis and interpretation is creating new opportunities for … of genomes from uncultivated microbes (Nature 2019). Other projects in the group include the sequencing and comparative …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… of quantity and thickness. Replacing older, thicker ice with younger, thinner ice means more fresh water — and less … and sequencing from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … Discovery program grants to C.L. Support from the Canada First Research Excellence Fund to Sentinelle Nord is …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… the naked eye, microscopy reveals unexpected complexity At first glance, the slightly murky waters in the tube look … would be like a human encountering another human as tall as Mount Everest,” said Jean-Marie Volland, a scientist with … keeps its DNA more organized. “The big surprise of the project was to realize that these genome copies that are …
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Draft genome sequence of marine alphaproteobacterial strain HIMB11, the first cultivated representative of a unique lineage within the Roseobacter clade possessing an unusually small genome
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The Surprising Structure of a Shrub Willow Sex Chromosome
… of the sex chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in plants can … , employ the evolutionary strategy we are far more familiar with: differentiating into male and female sexes. For the … (2017YFC0505203, 2016YFD0600101), and the National Key Project for Basic Research (2012CB114504). The work …
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JGI@25: From Life at the Extremes to Editing Genomes
National Laboratory – jointly the Nobel Prize in Chemistry with Emmanuelle Charpentier of the Max Planck Institute! This is the first science Nobel awarded to two women, with Charpentier … genomes from biofilm samples at the Richmond Mine in Iron Mountain, CA. Banfield’s observations of the CRISPRs in her …
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Consensus statement from the first RdRp Summit: advancing RNA virus discovery at scale across communities
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