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Uncovering Novel Genomes from Earth’s Microbiomes
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel … repository of 52,515 microbial draft genomes generated from environmental samples around the world, expanding the … work results from a collaboration involving more than 200 scientists, researchers at the U.S. Department of Energy …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
Genomics Capabilities Webinar inviting researchers to submit white papers to the Community Science Program’s  … doing when starting the lab. It has been, especially from an early career perspective, been absolutely … proposals for acceptance, it will be sent off for internal review to consider the biosecurity, biosafety, and …
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Synthesis
Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is … assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables users to validate hypotheses generated from mining genomic data by designing and assembling …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… in its environment, this alga reveals a remarkable ability to adapt to stress and rapid environmental changes. … Biology article highlights how one microalga collected from water on the ice surface handles such fluctuations. P. … increased nutrient uptake and decreased cell death.  Scientists then extracted RNA to analyze gene expression, to …
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Waiting to Respire
Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More than two … (JGI), a DOE Office of Science User Facility, and research scientist Frederik Schulz in Woyke’s Single Cells group had …
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Gut Fungi: Unexpected Source of Novel Chemicals
Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat thought to be too costly for them. The Science Anaerobic fungi, … of energy, and because anaerobic fungi can’t harness it, scientists long held that these fungi don’t have the energy …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
Program (CSP) Applications Webinar inviting researchers to submit white papers to the CSP  New Investigator call for … 21, 2020, will be included in the next review. Q&A from the Webinar: Q(uestion): Can people can mix and match … A: If you’re presenting preliminary data that’s been published, or if you want to give some background of the …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… wild populations for the first time. For years, Elizabeth (Toby) Kellogg and other researchers at the Danforth Plant … are genes out there that affect this phenotype.’”  Results from A “Massive Amount” of Sequencing  Seed dispersal is … and educators. HudsonAlpha has become a national and international leader in genetics and genomics research and …
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in bioenergy, carbon cycling and … Metabolites, and DNA Synthesis Science Programs and draw from the infrastructure of Genomic Technologies and Data …
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Kjiersten Fagnan
Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale postdoctoral fellowship at NERSC and LBNL’s Computational Research … Architectures for Chronic Pain and Opioid Addiction,” SC18: International Conference for High Performance Computing, …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… measurements of primary and secondary metabolites from plants, microorganisms, and environmental samples using … JGI Metabolomics Program , along with Jenny Mortimer, Director of Plant Systems Biology at the Joint BioEnergy … and up to 500 nonpolar metabolomic analyses.   Q:  Can a Scientist from India can apply for support? A: Anyone from …
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Sequencing and functional validation of the JGI Brachypodium distachyon T‐DNA collection
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