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Three Join the JGI User Executive Committee
… on review panels for the JGI Community Science Program (CSP) proposals. He  brings experience representative of the … to her early career success, and is currently a PI for both CSP New Investigator and large-scale CSP projects. Wilbanks has served on review panels for the …
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2024 Progress Report
… Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems … Over the last year, the U.S. Department of Energy Joint Genome Institute has continued its journey to realize our … We closed our 2018 Strategic Plan at the end of September, 2023 with over …
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Annual Genomics of Energy & Environment Meeting
… Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & …
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Nick Everson
… and logistics activities.  He returned to the Joint Genome Institute after serving as the Chief Operating … on the Council of UC Staff Assemblies (CUCSA) from 2015 to 2018, representing Berkeley Lab in this UC-wide staff …
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Dan Rokhsar
… human chromosomes. After successful completion of the Human Genome Project, Professor Dr. Rokhsar ’s team has continued … and evolutionary analysis of over fifty plant and animal genomes. He currently leads the JGI’s Computational Genomics group, and is past lead of the Eukaryotic Genome Program (2010-2019), and JGI Chief Informatics …
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Complete genome sequence of Paenibacillus sp. strain JDR-2
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Genome Sequence of the Alkaline-Tolerant Cellulomonas sp. Strain FA1
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Rex Malmstrom
… genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the … BONCAT-FACS.  Nature Comm 10(1) 1-10 Schulz, F. et al. 2018. Hidden diversity of soil giant viruses. Nature Comm . … PNAS 113 (28), E4069-E4078 Bendall, M.L. et al. 2016. Genome-wide selective sweeps and gene-specific sweeps in …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… help solve energy and environmental challenges.   The Human Genome Project began in 1990 when the U.S. Department of … studying Chromosome 5, which contains about 6% of the human genome . They discovered genes linked to conditions such as … Chromosome 19, which contains about 2% of the human genome. They were interested in genes involved in repair of …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… Streamlined genome with precise gene targeting transforms oil-producing … products.    The Science Scientists have fully decoded the genome of an oil-producing green alga, and demonstrated precise gene targeting in the genome in the November 2025 issue of The Plant Cell. …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of … that “taught” a computer how to classify 101 representative genomes of Dothideomycetes, the largest class of fungi, by … enabled in part through  JGI’s  Community Science Program (CSP) , as several approved proposals have contributed toward …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of … microorganisms had a close relationship. Then, using metagenomes and metatranscriptomes generated by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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