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Kjiersten Fagnan
Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing … methods for reacting subsurface flows, and evolved into scalable methods for scientific data analysis. In 2014 Dr. … Seattle BA Applied Mathematics University of California, Berkeley MBA Haas School of Business, University of …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
In this short video, UC Merced undergraduate and graduate … learned at the JGI is how to really work in the government lab. And I find this really valuable because in this time … was the first time I was introduced into what a government lab and what this future could look like. Edward Lu : I …
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Introducing New Members of the JGI User Executive Committee
… – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six other JGI users already serving on the UEC – go here … la Recherche Scientifique (CNRS) in October and maintains a lab at Michigan State University. She aims to help overcome … in reaching and engaging with new international collaborators and other scientific organizations. Fungal …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to some of the … the other lead scientists had embarked on the study — a collaboration of eight institutions led by UEA and including … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory — with a desire to understand …
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The JGI announces 2024 awardees for our Community Science Program annual call
… our 2024 Community Science Program Annual Call. “It’s exciting to see the diverse portfolio of successful CSP proposals … relevant to the DOE’s mission, and I look forward to seeing their outcomes.” The annual CSP call is focused on … of Biological and Environmental Research (BER) missions in: sustainable biofuel and bioproducts production, global …
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Microbiome Data Science Team
Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have … a number of notable achievements that showcase our collaborations and capabilities to enable great science that … rarely grow well in environmental samples brought back to a lab, because they often need unique conditions and a …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who … and plasmid workflows for the National Microbiome Data Collaborative.  This award recognizes distinguished research … (VEGA) Symposium , which will take place later this year in Berkeley, Calif. Convening the “viral ecogenomics” …
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DOE JGI Interns Share Their Summer Experiences
This summer, the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of … the opportunity to spend time out in the field, work at the lab bench, and also do some computational analyses at their … were two U.S. Department of Energy Science Undergraduate Laboratory Internship (SULI) Program students. Sharon Cao …
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Nikos Kyrpides
Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the … of Illinois at Urbana-Champaign and at Argonne National Laboratory. Dr. Kyrpides’ research focus on Microbiome … Researcher (Biology & Biochemistry) (2014-2023) Lawrence Berkeley National Laboratory Outstanding Scientific …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field studies related … of Puerto Nuevo’s coastal waters and sediment with collaborators at the Center for Scientific Research and Higher … Dr. Tanja Woyke and additionally mentored by members of her lab – especially Dr. Robert Bowers who also greatly …
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of "primary … (JGI), a DOE Office of Science User Facility located at Berkeley Laboratory, built off past experience in developing …
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