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The Soil Blooms Green
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Dealing with Drought: Uncovering Sorghum’s Secrets
… and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Berkeley National Laboratory (Berkeley Lab).     The Impact Half a billion people consider sorghum a staple food in … plants with nutrients and pathogen protection. Specifically, gene expression in that set, implicated in AMF …
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The Case for Conservation
… graduate student Sarah Carey, now at the HudsonAlpha Institute for Biotechnology, reported that high quality genome … size of the next largest chromosome. As the study first author Carey put it, these sex chromosomes first evolved when the Earth’s … Grant-In-Aid of Research, and Society for the Study of Evolution Rosemary Grant Award to S.B.C.; NSF DEB-1239992 to …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… carbon and responds to stress. The Impact Despite constituting less than 5% of land on Earth, peatlands store … at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence … chromosomes ever identified in the plant kingdom. Specifically, researchers found that female plants within a species …
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Extracting the Secrets of Secondary Metabolites
… accurately editing genomes, its effectiveness has historically been limited due to the lack of robust tools available … and other industries — yet there’s still so much about them we don’t know.  Unlocking the power of secondary … or activate certain genes and assess how these edits affect functionality.  CRAGE allows for the transplanting of these …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… hold genetic blueprints for dozens of complex compounds, but stay largely dormant under standard conditions. As … pathways. By tracking gene activity and chemical output over time, the team mapped how the bacterium redirects … each compound are encoded in a dedicated set of genes called a biosynthetic gene cluster. However, most of these …
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Forest Fungi, Seagrass, and a New View of Symbiosis
… Three stories of JGI-supported research, connected to nutrient cycles. Francis Martin and Lucas Auer discuss their …
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Chomping Toward Better Plastic Recycling
… We know all kinds of things about plastic – except, how to break it down for recycling. But some hungry insects can digest plastic. So researchers …
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A Sorghum Pangenome Opens More Doors to Discovery
… into other crops for biofuels and bioproducts. Historically, work on sorghum has focused on producing high-quality … a Research Faculty Investigator at the HudsonAlpha Institute for Biotechnology Genome Sequencing Center and a member … and bioenergy production. Together with resequencing of 1,984 cultivars and landraces, these data capture the …
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Panel Discussion: Launching & Sustaining Startups in Synthetic Biology
… When: August 29th, 3:00 pm – 5:30 pm 3:00 pm – 4:15 pm: Panel discussion, Q&A followed by: 4:15 pm – 5:30 pm: Hosted Hoppy Hour @ Calicraft Brewing, Walnut Creek Where:  Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek Featuring a casual, … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Streamlining Regulon Identification in Bacteria
… sequencing, they were able to identify the target genes of 11 sigma factors in Streptomyces coelicolor . The Impact As … of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … factor. Predicting those relationships bioinformatically is almost impossible, and the experimental process for …
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What Happens To a Rainforest When You Dial Up Drought?
… and soil microbes play a key role in pulling that carbon out of the atmosphere. This episode, researchers take a look …
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