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… comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial Genomes and Metagenomes Program since 2011. Prior to joining the DOE Joint … Unraveling the functional dark matter through global metagenomics. Nature . 622(7983):594-602. Camargo AP. et al. …

… in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the … learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria. PLoS … 2020. CheckV assesses the quality and completeness of metagenome-assembled viral genomes. Nature biotechnology 39, …

… His group also handles the Stable Isotope Probing (SIP) Metagenomics pipeline  that reveals in situ functional … et al. 2024.  Spatial co-transcriptomics reveals discrete stages of the arbuscular mycorrhizal symbiosis. Nature Plants … Genome-wide selective sweeps and gene-specific sweeps in natural bacterial populations. ISME Journal 10 (7), 1589 …

… system. He previously led the NGS Software team and metagenomic data platform at Zymergen, a synthetic biology … D., Serber, Z., Shock, J., Sneddon, M., and Yang, X. Metagenomic library and natural product discovery platform. WO2021163637A1 , PCT …

… Schadt, C., Martin, S., Carrell, A. et al. An integrated metagenomic, metabolomic and transcriptomic survey of Populus … CL, et al. Anaerobic gut fungi are an untapped reservoir of natural products. Proceedings of the National Academy of …

… NJ. New keys to unlock the treasure trove of microbial natural products. Nat Rev Microbiol. 2021 Nov;19(11):683. … H, Udwary D, Yoshikuni Y. New voyages to explore the natural product galaxy. J Ind Microbiol Biotechnol. 2019 …

… A, et al. Anaerobic gut fungi are an untapped reservoir of natural products. Proc Natl Acad Sci U S A. 2021;118. … Otani H, de Raad M, Kuftin AN, et al. Mass Spectrometry for Natural Product Discovery. 2020.  Reference Module in …