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FICUS-NERSC/KBASE
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Matt Blow
… to study genome regulation in human and other vertebrate genomes. When he joined the JGI, he worked as a project … Bowers et al. 2024. scMicrobe PTA: Near Complete Genomes from Single Bacterial Cells bioRxiv , 2024.01. …
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A Collaboration to Improve Plant Genome Annotations Across Species
… Avinash:   JGI puts huge efforts into generating reference genomes for new species allowing it to fill gaps in the …
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Influence of the polar light cycle on seasonal dynamics of an Antarctic lake microbial community
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Industry Engagement Program
… Science Program, the JGI sequenced and characterized 270 genomes of the Clostridium genus for LanzaTech, information …
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Dan Rokhsar
… and evolutionary analysis of over fifty plant and animal genomes. He currently leads the JGI’s Computational Genomics …
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Adopt-A-Genome
… In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These students analyze the genomes, write reports, and publish first-author papers, … Soghomonian share what it was like to take on one of these genomes.  …
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Trent Northen
… Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of microbes …
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Better Genome Editing for Bioenergy
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Coevolution of the Ess1-CTD axis in polar fungi suggests a role for phase separation in cold tolerance
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Statement on the Use of Genomics Data
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of … that “taught” a computer how to classify 101 representative genomes of Dothideomycetes, the largest class of fungi, by … to identify data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The …
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