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A Shrubbier Version of Rubber
… Right now, our natural rubber comes from just one tree species: Hevea brasiliensis . It’s great at producing latex that becomes rubber, but it’s vulnerable to disease and climate shifts. So researchers are looking into a …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida … waters and clouds of insects hover just above. Described as a “river of grass” that stretches some 580,000 square … their faces.” Eloe-Fadrosh considers the experience the highlight of her past year’s work at the JGI. As the students …
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2024 Progress Report
… The Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative … processed 13,700 metabolomics samples With our users, 247 publications were published   …
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A Sorghum Pangenome Opens More Doors to Discovery
… Leveraging decades of technological development, dozens of … and researchers to harness the traits that let this biomass powerhouse thrive. Within its genome, Sorghum bicolor … Development (USAID) also supported the work.   Publication:  Morris, G.P., Harder, A.M., Healey, A.L.  et …
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is … to JGI data policies. Since completion of the HGP, the JGI has sustained its commitment to uploading sequence data … are requested to be held until a specified date, or the publication date, whichever comes first. For nearly 40 …
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Eelgrass Proves to Be Much Younger Than We Thought
… Recent study shows eelgrass has been around about 2.5 million years less than … in various locations.  One group investigated changes in protein sequences, while others analyzed single point … This study was supported by a PhD scholarship from the China Scholarship …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above … (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… Streamlined genome with precise gene targeting transforms … alga into a powerful platform for developing ​​bio-based industrial products.    The Science Scientists have … RNA genes with unusual structures that could be useful for protein production and other biotech applications. Engineers …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… JGI-led team significantly expands the global diversity of large and … population, the number of viruses in the same drop—the vast majority not harmful to humans could be even larger. … to mine, bin and then filter the data for the major capsid protein (MCP) to identify NCLDV viruses. JGI researchers …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately … the intricate details of life’s genetic blueprint has long been a significant challenge in genomics. Enter … those regulatory elements like promoters in front of this protein coding gene, like a structure.”  Think of verbs and …
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SPRUCE-ing Up Science
… A former JGI intern is now applying his internship lessons … Lawrence said. While interning, he recalls interacting with renowned scientists who were involved in the … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Protein annotations provide insights into environmental … Microbial Genomes and Microbiomes (IMG/M) platform — has been developed to help inform scientists and researchers … (within IMG).  The Impact The initial analysis highlights abundances of gene annotations that provide insights …
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