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Programs & Platform Leads
… As an Integrative Genome Science User Facility, the JGI plays a leadership role in providing genome science … security. In complement to the Community Science Program, JGI researchers drive innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, …
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From Competition to Cooperation
… evolved to establish symbiotic relationships with plants (mycorrhizae), and particularly how fungi that feed … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the fungal genomes used in the study are available on the JGI fungal portal  MycoCosm . The work builds upon several …
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New Lineages of Life Group
… into the limits of life and potential for life on other planets. …
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Exploring the Diversity of the American Prairie’s Switchgrass
… A tall native plant of the North American prairie, switchgrass ( Panicum … diversity. So, a team of scientists made an ambitious plan to begin to link the plant’s varying traits — height, biomass, hardiness to cold, …
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FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… National Laboratory when applying to the FY2024 EMSL-JGI FICUS collaborative proposal call . Letters of Intent … power of genomics and molecular characterization from the JGI and EMSL in one proposed research project. In the same … changes after harvest treatment. Facility Contacts: JGI : For general questions, contact  Christa Pennacchio , …
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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and biochemically characterized at UC … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. The sequences … then a postdoctoral fellow with Doudna and longtime JGI collaborator Jill Banfield, also at UC Berkeley. …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… (Toby) Kellogg and other researchers at the Danforth Plant Science Center (Danforth Center) drove up and down the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … genome sequences for nearly 600 green millet plants and released a very high quality reference S. viridis genome …
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, … for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC Engagement Lead with a focus on adapting JGI workloads to run on supercomputing hardware and worked …
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CSP Large Scale Call
… that are listed in the call and leverage the diversity of JGI technical and analytical capabilities. All proposals … free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. … work will NOT be considered under this program. Plant pathogens will only be considered if they are of …
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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI researchers for bioinformatics internship opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from …
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Jeremy Schmutz
… Mr. Schmutz’s involvement with the JGI dates back to 1997, when he was working for the Stanford … For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community … Jeremy Schmutz is the Plant Science Program Head at the JGI. Click to learn more about the program's areas of focus, …
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What Happens Underground Influences Global Nutrient Cycles
… DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. Through … Laboratory (EMSL) and the  DOE Joint Genome Institute (JGI)—have selected 11 proposals for support from 53 received … gene functions that may be relevant to both algae and land plants.  Within the biogeochemistry group, one of the four …
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