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Protein structure determination using metagenome sequence data
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… JGI-led team significantly expands the global diversity of … and giant viruses. While the microbes in a single drop of water could outnumber a small city’s population, the number … viruses from environmental sequences across the globe, then using these sequences to make inferences about the …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… view into a symbiosis could offer benefits to address climate change: pulling atmospheric carbon into soil and … been able to study both sides of this interaction up close, using RNA sequencing to understand gene expression: one of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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JGI on the 2021 Highly Cited Researchers List
… Congratulations to the 2021 Highly Cited Researchers at the JGI! … was part of a long-term multi-institutional research team that combined field data with a reference switchgrass …
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
… In   April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25.  On March 17, 2020, a shelter-in-place order for all … took effect in six San Francisco Bay Area counties. The JGI, located at Lawrence Berkeley National Laboratory, is …
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Axel Visel
… the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the development and implementation of strategic initiatives at the JGI. Dr. Visel received his Ph.D. in 2004 from the Max … Axel Visel is the JGI's Deputy for Science Programs. Click to learn more about …
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Examples: Successful LOIs & Submissions
… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating … RNA-seq and metabolomic insights in lignin biosynthetic pathway edited populus …
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Marine Microbe Contains Multitudes
… Pacific Subtropical Gyre, microbes tend to stay localized at different depths. But SAR324 can be found throughout the … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Science Program . The metagenomes were also processed using the JGI-developed software suite, BBTools , and …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… down tough plant fibers. The Science Walk in a temperate forest filled with Norway spruce trees, and microbial … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … role that fungi can’t fulfill by fixing nitrogen and using it as an energy source. No fungi are known to be able …
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Mindfully Moving JGI
… JGI is in the process of shifting its operations from Walnut Creek to the heart of the Berkeley Lab … Turner. How extensive? Consider that the process of moving 250 people and their equipment from 4 single-story buildings … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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JGI Scientists Pen Genome Watch Articles
… Tanja Woyke and other JGI researchers made their debut writing for the Nature Reviews Microbiology column last year — and there’s … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Eelgrass Proves to Be Much Younger Than We Thought
… about 2.5 million years less than previously believed.  The Science Eelgrass, one of the most abundant plants in the ocean, originated in Japan before spreading around the globe. Now, … ago. The study shows that figure is likely closer to a mere 250,000 years — with many key colonization events in the …
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