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… a vast range of organisms and ecosystems. These kinds of data could open opportunities along multiple avenues, … community with advanced genomic capabilities, large scale data, and professional expertise while responsibly managing … expect to offer our user community an exciting range of new tools and capabilities to support their scientific …

… of their well-designed sampling and analysis of their data at the time. Following the publication of their paper … Canada at Summerland BC aimed to generate whole genome data of Olpidium. This required an enormous amount of effort … genome and transcriptome data were generated, bioinformatic tools for binning metagenome data involved with mainly …

… Berkeley National Laboratory (Berkeley Lab). “These data can also be used for machine learning and artificial … capture the vast nature of fungal diversity. Examining databases like MycoCosm , the JGI’s online fungal genomics … artificial intelligence to genomics. The comparative datasets that revealed evolutionary patterns are now …

… it, viruses are most likely in your system and in your data, and they’re probably influencing the microbes there,” … In 2016, Nikos Kyrpides at the JGI led a team that combed datasets from around the world, finding over 125,000 partial … the 2022 VEGA meeting below). Another JGI-developed tool, CheckV, assesses viral genomes, and grades their quality …

… Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area … we provide advanced genomic capabilities, large-scale data, and professional expertise to support the global … number of users with a record output of products, making data easier to access and use, and by investing in the …

… analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for … through implementation of advanced analysis pipelines and tools as well as development and implementation of …

… describe their deep dives into genomics, computational tools, and big data.  …

… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome … team of engineers and scientists builds and operates the data and compute platforms and bioinformatics annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging AI-enabled capabilities for …

… gene clusters (BGCs.) As reported in the recent Database issue of the journal Nucleic Acids Research , … Collaboratory (SMC) has launched as an interactive public database for the research community. With more than 13 … using multiple commonly used sequence analysis tools is a means of expediting BGC and biosynthesis …

… strain engineering and bioinformatic tool development/data analysis for synthetic biology and functional genomics. …

… Learn more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive web-based tools for comparative genomics and community annotation. …