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Applying Viral Genomics Expertise to Understanding the Human Virome
… to develop tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky Way, viruses outnumber the microbes by at least another order of magnitude. For years, … how the interactions between viruses and their host microbes impact the regulation of global nutrient cycles. …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… ecosystem. The Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep … to infect and destroy the host archaea – and how the  microbes resist. The battle waged below the Earth’s surface … organic carbon which can serve as a food source for other microbes into the environment. Summary In J. R. R. Tolkien’s …
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You Can Move, But You Can’t Hide
… the interactions that happen between tiny organisms (microbes) located in soils and water. MGEs like viruses and … ecosystems by killing other cells. Over time, MGEs can help microbes gain a competitive edge within an ecosystem. They …
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Improved High-Quality Draft Genome Sequence of the Eurypsychrophile Rhodotorula sp. JG1b, Isolated from Permafrost in the Hyperarid Upper-Elevation McMurdo Dry Valleys, Antarctica
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What Happens To a Rainforest When You Dial Up Drought?
… store a big fraction of all the carbon on Earth, and soil microbes play a key role in pulling that carbon out of the …
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The Power of One, Amplified
… between the analyzed community members. The Impact Though microbes help regulate the planet’s nutrient cycles and are … of tens of thousands of previously unknown and uncultivated microbes through metagenomics. Such techniques take … temperatures can reach as high as 80°C (~190°F), yet microbes thrive here. The communities in this extreme …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… analysis to better characterize how viruses infect soil microbes and influence how soil ecosystems function. He was …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… of course, the cells of other organisms. As they infect microbes like bacteria, algae and protists, all kinds of … and in your data, and they’re probably influencing the microbes there,” said Simon Roux , the Viral Genomics Group … do anything with a microbiome — you know, target specific microbes or change the behavior of this bacteria — most …
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Supercharging SIP in the Fungal Hyphosphere
… it. The isotopes are incorporated into the DNA of specific microbes who consume the labeled food or water. Later, their … which microorganisms used the labeled substance and which microbes did not. This is normally an arduous wet lab … them. In this case, scientists identified a wide variety of microbes, including both bacteria and archaea, actively …
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SIPs with Standards
… microbial communities. These experiments can show which microbes are handling specific nutrients, or what they're …
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Year in Review: JGI’s 2018 Progress Report Available Now
Yosemite National Park, taken by JGI’s own Jon Bertsch. Microbes isolated from Mono Lake were sequenced by the JGI …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Computational Sieves to Filter Sequences There are more microbes on the planet than particles in a handful of dirt, and viruses vastly outnumber the microbes. Advances in sequencing technologies and … that infect not just crops, animals and humans, but also microbes whose presence or absence can impact the planet’s …
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