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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… industry, and government organizations for three days of scientific presentation, interactive panel discussions, … and informal networking events. JGI will present both a genome center talk and a tech talk. Stop by the JGI booth to …
Learn more
Ben Bowen
… BS – University of Arkansas, Fayetteville, Chemical Engineering Ph. D. – … 2024 Berkeley Lab Recognition of Excellence Award 2016 R&D 100 Winner 2014 Berkeley Lab … others (2010). Proteomics analysis of human skeletal muscle reveals novel abnormalities in obesity and type 2 diabetes. …
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JGIota: The Algae Nicknamed ‘Chlamy’
… works on this alga, how researchers managed to sequence its genome, and what it has to teach us about other organisms – … in the Environmental Genomics & Systems Biology Division of the Berkeley Lab Biosciences Area.] …
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Exploring the Diversity of the American Prairie’s Switchgrass
… A tall native plant of the North American prairie, switchgrass ( Panicum virgatum ) has long been a tantalizing potential biofuel feedstock. But switchgrass has a complex genome and, as a species, encompasses dizzying diversity. …
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2025 Progress Report
… to advance biotechnology. Mission  As a U.S. Department of Energy Office of Science user facility supported by the Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, …
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Accelerating Metagenomics Discoveries with Deep Learning
… insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms … biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector … to vectorize protein sequences. Sevim is part of the JGI Genome R&D Group and is one of more than 100 scientists and …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… Over 40 percent of the cereal crop’s genes respond to drought stress. The … Laboratory, and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … usable for conventional food crops. For that reason, its genome was sequenced by the JGI in 2009 and it is considered …
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JGI Accepts 17 Proposals for Community Science Program
… Interactions Within Ecosystems Latest portfolio of approved proposals highlight biodiversity and how … (CSP) call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … international collaboration that produced the reference genome sequence for Eucalyptus grandis. Accessing recently …
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FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… On February 8, 2024, the DOE Joint Genome Institute and the Environmental Molecular Sciences … FY2024 EMSL-JGI FICUS collaborative proposal call . Letters of Intent for the joint call are due March 7, 2024. The FICUS call allows researchers to combine the power of genomics and molecular characterization from the JGI and …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… chemical factories. They hold genetic blueprints for dozens of complex compounds, but stay largely dormant under … Researchers with the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … that precisely maps where transcription begins on the genome. This revealed a sweeping cellular response: The …
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Busting the Unbreakable Lignin
… New evidence shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main … with researchers at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … RNA sequencing and alignment to the reference fungal  genome . The study’s pivotal NMR (nuclear magnetic …
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Streamlining Regulon Identification in Bacteria
… with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory … in Streptomyces coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions … of the mission of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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