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Charting Progress toward Professional Goals
… from their summer experiences at the JGI Berkeley Lab offers a variety of programs to help inspire and train the next generation of … CalTeach initiative. During their time at the Joint Genome Institute, they interacted with interns from other …
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Rex Malmstrom
… Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth … genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the …
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Mike Sneddon
… in the Data Science and Informatics Department at the Joint Genome Institute. His team of engineers and scientists builds and operates the data and … science.  Dr. Sneddon is an accomplished leader in data, software, compute, and AI for large-scale genomics and lab …
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
… In   April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25.  On March 17, 2020, a shelter-in-place order for all residents took … at Lawrence Berkeley National Laboratory, is located in one of those counties. The shelter-in-place order has since been …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… for the global research community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released its newest 5-Year … pathogen-agnostic detection and prediction strategies for types of as-yet unknown pathogens. The JGI’s advanced data …
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In silico analysis of the expression profile of AA9 Lytic Polysaccharide Monooxygenases (LPMOs) and the CDH Cellobiose Dehydrogenase enzyme in wood-degrader Agaricomycetes. The Pleurotus ostreatus case
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Nandita Nath
… Nandita is involved in developing new methods to improve genome recovery from single cells and to build sequencing …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
… JGI and the Workforce Development & Education department of Lawrence Berkeley National Laboratory (Berkeley Lab) … were: Simon Roux and Matthew Kellom for the JGI Metagenome Program Ellen Dow and Elisha Wood-Charlson for the … Metabolomics Platform Blake Simmons for The BioManufactory Completed VFP applications are due on January 12, 2022. …
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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Berkeley Lab maintains a  calendar of Earth Month events throughout April. This year, a new … striving for sustainability in lab spaces as well as offices. These efforts dovetail into sustainability … cut its greenhouse gas emissions in half, relative to its 2015 baseline emissions.  Reaching that goal will mean …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first sampled the area in summer 2016.  She described the microbial diversity patterns of Puerto Nuevo’s coastal waters and sediment with …
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Danielle Goudeau
… combines custom flow cytometric analysis, cell sorting, genome amplification, PCR screening, and 16S sequencing. She also develops novel flow cytometry protocols for targeted recovery of specific microbes. …
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Mindfully Moving JGI
… JGI is in the process of shifting its operations from Walnut Creek to the heart of the Berkeley Lab campus. By Friday, October 18, the production sequencing labs in Building 100 were … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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