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Six join FICUS program in 2026
… The JGI is excited to welcome six to the Facilities Integrating Collaborations for User Facilities (FICUS) … and other national user facilities. Focus areas for these projects include biofuels, biomaterials and bioproducts; … and multidisciplinary nature of DOE mission science projects, this proposal call aims to encourage innovative …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… This single environmental trigger highlights efficiency for users … Researchers with the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … that precisely maps where transcription begins on the genome. This revealed a sweeping cellular response: The …
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Matthew Kellom
… Matt is broadly interested in the interactions between microbial life and environment, … interest. Matt also supports various CSP and FICUS user projects for the Metagenome Program. …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Protein annotations provide insights into environmental tendencies The Science The  Metagenome Stability Diagram — a tool within the Integrated … Neighbor (KNN) Classification. LDA is a supervised data compression technique that was used to take the complex, … The work conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office …
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Neha Varghese
… Neha’s key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s … community. She also provides support for user science and projects through implementation of advanced analysis …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… for our 2025 Community Science Program Annual Call. These projects include cutting-edge research into microbial communities — … Deputy Director of JGI’s User Programs. “Many of these projects are large in scale and involve multiple …
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Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription factors with their target genes. The … in Streptomyces coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions … for growth and survival across various environments are expressed when their functions are needed. Data yielded …
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Ben Bowen
… Specializing in mass spectrometry-centered projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and integrating … BS – University of Arkansas, Fayetteville, Chemical Engineering Ph. D. – Arizona State University, Tempe, Chemical …
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JGI announces 2024 New Investigator portfolio
… The JGI is eager to work and share our tools with a widening circle of researchers. That’s why each year we look for novel research projects — aligned with DOE missions and from PIs who have …  resources, these researchers will dive into a range of projects spanning the resilience of desert grasslands to the …
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A Mentor’s Perspective on Training the Next Generation
… Over the years, hundreds of interns have come to the JGI from all parts of the globe to gain lab experience and contribute to ongoing projects. In one way or another, they’ve all mentioned how …
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Dispatches From JGI Interns
… Every summer, the flagship JGI-UC Merced Internship Program invites undergraduate and graduate students to engage in real, impactful research projects with JGI mentors. In this episode, hear two interns …
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JGI Hosts GPU Hackathon in May
… WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit (GPU)-based high-performance … (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user …
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