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Leo Baumgart
… at the University of California, San Diego. As the Sequencing Technology Implementation Lead, he directs a … responsible for piloting and operationalizing new genomic technologies, integrating automated liquid handling and … production workflows. He developed and scaled the multiDAP-seq assay, a method that enables high-throughput …
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Pinning Down a Piece of Photosynthesis
… new insights into how these ocean photosynthesizers cycle carbon in changing conditions. The products of … the air we breathe and the fuel for food webs as they turn carbon dioxide and water into oxygen and sugars. How … of that machine — photosynthesizers’ DNA and RNA. These sequences provide a list of machine parts, and an idea of …
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When “The Blob” Made It Hotter Under the Water
… in the ocean drive the biological pump that takes carbon from the atmosphere and keeps it in the deep ocean. … microbes and by extension, the ocean’s capacity to act as a carbon sink. Summary As global temperatures rise, so do … samples. Genomic DNA extracted from the water samples were sequenced by the U.S. Department of Energy (DOE) Joint …
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An Integrated Dataset to Understand Ecosystem Interaction
… economic value as both biofuel feedstock and their role in carbon sequestration. Poplar trees grow quickly in a variety of … into how these ecosystems cycle nutrients like nitrogen and carbon, as well as improving the tree’s production as a …
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User Programs
… For accepted proposals, sequencing, synthesis, metabolomics and analysis will be … with DOE mission-relevant projects that call for expansive sequencing, synthetic biology, and metabolomics capabilities … Letters of Intent. Proposals may include synthetic biology, sequencing, and metabolomics. Proposals may include …
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Integrating Experimentation with Data
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The Busy World of Deep Sea Eruptions
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The JGI announces 2024 awardees for our Community Science Program annual call
… in: sustainable biofuel and bioproducts production, global carbon and nutrient cycling, and biogeochemistry. You can …
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Natural Prodcast Episode 16: Marcy Balunas
… with any kind of gene cluster identification, doing it with sequence alone you have to have some kind of a template to … Then you have to first– there’s an interplay between the sequence and the chemistry where you have to have one or the … and you should be able to find genes in the organism in its sequence that encode for that biosynthesis. But sometimes …
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 2
… and isotopes to track how viruses influence the flow of carbon in permafrost.  …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… Earth conditions. The Science Through a combination of sequencing tools and techniques applied to samples collected … thousands to millions of copies of a particular DNA sequence from just a few pieces of DNA. Summary The extreme …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… This was facilitated in part by RNA library preparation and sequencing from the U.S. Department of Energy (DOE) Joint … was by way of the Fonds de recherche du Québec - Nature et Technologies (FRQNT) for Québec Océan and an FRQNT Team …
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