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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with the seasons. The Science … when it comes to nutrient cycling in polar regions. While microbial populations in other Antarctic lakes and the … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Making a Lichen Together
… For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better … is widespread and cosmopolitan: more than 20,000 ascomycete species and hundreds of microalgae are able to partner to … could help inform efforts at bioengineering symbiotic microbial consortia for bioenergy crops. And because lichens …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… hills and valleys, on a smaller scale. Depending on the species, some sphagnum may prefer the dryer, more elevated … change. Researchers at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … and others that preferred the hollows. Those genome sequences showed not only that the sex of a sphagnum plant …
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Complete Genome Sequence of Nitrobacter hamburgensis X14 and Comparative Genomic Analysis of Species within the Genus Nitrobacter▿ †
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A Sorghum Pangenome Opens More Doors to Discovery
… decades of technological development, dozens of reference genomes and thousands of resequenced sorghum varieties, a … Sequencing Center. Surfacing new knowledge with a pangenome Using this pangenome resource, this team demonstrated ways … Development (USAID) also supported the work.   Publication:  Morris, G.P., Harder, A.M., Healey, A.L.  et …
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Soil virus offers insight into maintaining microorganisms
… Using the IMG/M data portal, researchers have identified a … data portal of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … to another, which can have a significant impact on the microbial communities within soil. Using metagenomics, …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… Analysis reveals the microbial community involved in a bioremediation effort. The … break down PCE into the chemical compound ethene. Applying genome sequencing and analysis, the researchers identified other bacteria and microbial processes that support PCE biodegradation. The …
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Cataloging the Microbes that Manage the Health of River Systems
… a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … this may be the first publicly available, river-focused microbial resource that provides information at multiple … (BER) grants DE-SC0023084, DE-SC0021350, and DE-AC02-05CH11231. Partial support by US National Science Foundation …
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Whole Community Metatranscriptomes and Lipidomes Reveal Diverse Responses Among Antarctic Phytoplankton to Changing Ice Conditions
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Experimental factors affecting PCR-based estimates of microbial species richness and evenness
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New Biological Insights Into How Deforestation in Amazonia Affects Soil Microbial Communities Using Metagenomics and Metagenome-Assembled Genomes
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Draft Genome Sequences of Three Strains of a Novel Rhizobiales Species Isolated from Forest Soil
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