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… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … 2 of our “primer” episode, so if you ended up here somehow without having listened to the first part, you might be a … and you can see that different Frankia have different size genomes depending on what kinds of plants, and what kinds of …

… (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … has developed a command-line tool called CheckV that can automatically do both. The work was led by research … the virus-host boundary clearly defined using functional annotation methods, it was possible to distinguish between …

… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version … website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  … for the gene in question, so you can download sequences, annotations, and gene structures. These genomes’ organism …

… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … is one of the largest data repositories of its kind, with an interactive browser that allows algal scientists and …

… Journal publication caps JGI pilot project with fledgling Florida … school scientists. The Florida Everglades evokes images of fanboats skimming over swamps, while alligators peer … email inquiries, sent through JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) system, reached  Emiley …

… an integrated approach to genome recovery from metagenomes. The Science Through the JGI’s Emerging Technologies … The Impact Understanding how individual microbes interact with each other in a community, and characterizing their … been utilizing metagenomics as a way to study a collection of hard-to-culture microbes, but the efficacy of this …

… With a new methodology, scientists are now getting more … results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for understanding the … U.S. Department of Energy Joint Genome Institute (https:// ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office …

… “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be spotted with a striped scarf, striped hat, round-rimmed glasses, or … are filamentous viruses with small, single-stranded DNA genomes and a unique chronic infection cycle. “We’re not …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a … crop. In 2018, the JGI had sequenced and assembled the genomes of two varieties of a close relative and model … of work; as sequencing technologies advanced, assembly and annotation of the genome sequence improved in parallel. The …

… Department at the Joint Genome Institute. His team of engineers and scientists builds and operates the data and compute platforms and bioinformatics annotation pipelines that support JGI’s portals, tools, and … science.  Dr. Sneddon is an accomplished leader in data, software, compute, and AI for large-scale genomics and lab …