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iVirus 2.0: Cyberinfrastructure-supported tools and data to power DNA virus ecology
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Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome
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VirSorter2: a multi-classifier, expert-guided approach to detect diverse DNA and RNA viruses
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Taxonomic assignment of uncultivated prokaryotic virus genomes is enabled by gene-sharing networks
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Highly diverse and unknown viruses may enhance Antarctic endoliths’ adaptability
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Fast and accurate identification of plasmids and viruses in sequencing data using geNomad
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Identification of over ten thousand candidate structured RNAs in viruses and phages
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics … B.S in Biomedical Engineering, Johns Hopkins University; Ph.D. in Bioengineering, … reservoir of natural products. Proc Natl Acad Sci U S A. 2021;118. doi:10.1073/pnas.2019855118 2. Murphy KM, Edwards …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… Maureen Coleman and Hugh Cross; [Below] Zac Freedman, Martin Jonikas, Lotus Lofgren, Fumito Maruyama, Lauren Stadler, … of sequence. “We are thrilled to support this year’s CSP awardees as they embark on ambitious projects that span … research community. See below for the full list of 2026 CSP Large Scale Call recipients.    …
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Jeremy Schmutz
… Mr. Schmutz’s involvement with the JGI dates back to 1997, when he was working for the Stanford Human Genome Center, now the … Institute and the collaborative projects funded through the CSP program. In addition to continuing to develop strategies … to learn more about the program's areas of focus, major initiatives and more.  …
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Fungal Friends or Foes in Plant Roots
… Uncovering associations between plant roots and fungi that can help … analysis identified fungal gene families that help determine if these fungi act as friends or foes. The Impact … work was partly enabled by a JGI Community Science Program (CSP) proposal led by INRAE’s Francis Martin that contributed …
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Webinar: Introducing the BioSANS capability
… The BioSANS instrument is at the Center for Structural Molecular Biology … (CSMB) at Oak Ridge National Laboratory.   On March 2, 2021, the Environmental Molecular Sciences Laboratory hosted a webinar to showcase how researchers can gain access to the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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