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Crysten Blaby-Haas
Molecular Foundry, a nanoscale research and knowledge-based user facility at Berkeley lab. She earned her PhD in … of Florida, working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in … Niyogi KK, Schmutz J, Theg SM, Blaby-Haas CE, Merchant SS. (2021) Widespread polycistronic gene expression in green …
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Introducing New Members of the JGI User Executive Committee
The JGI welcomes three new members to the JGI User Executive Committee (UEC) : Roland Hatzenpichler of … of the University of Arizona! They join nine other JGI users already serving on the UEC – go here to view the full … and can serve no more than two consecutive terms. In late 2021, the JGI launched a solicitation for nominations for …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… publications that Grimwood contributed to include: A 2021 Nature paper announcing a high-quality reference sequence of the complex switchgrass genome , using samples from common gardens growing across the … involved researchers at the University of Texas at Austin, HudsonAlpha, and the JGI. Building off this work, …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… and around Earth outnumber the stars in the Milky Way, viruses outnumber the microbes by at least another order of … at the DOE Joint Genome Institute, a DOE Office of Science user facility located at Lawrence Berkeley National … metagenome-assembled viral genomes ( Nature Biotechnology , 2021), geNomad , a tool for identifying mobile genetic …
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JGIota: The Algae Nicknamed ‘Chlamy’
This shorter episode is about a tiny, single-celled alga – Chlamydomonas reinhardtii … managed to sequence its genome, and what it has to teach us about other organisms – like plants. [ Editor’s Note: …
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The International Virus Bioinformatics Meeting 2020
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JGI Scientists Pen Genome Watch Articles
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … .  The latest article, published January 27, is about engineering plants and their microbiomes for more … Sanger Institute.” Last year for the column, Woyke wrote about the research field’s move toward characterizing the …
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Scaling Up Existing Skill Sets
… experience working intermediately between academia and industry, which is something I didn’t even know existed before. … my Ph.D. What is/has been one of your favorite things about your JGI internship?  Doing the JGI internship has … as JGI/LBNL. What is/has been one of your favorite things about your JGI internship? My most favorite parts of the …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… that will help solve energy and environmental challenges.   Usually, plants have the upper hand against any kind of … of years evolving tactics against potential threats. “Because plants can’t run away, they’ve evolved these really … complexes that work like assembly lines for efficiency.  In 2021, her team saw that four strains of anaerobic fungi …
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PhycoCosm Tutorial
Learn more about PhycoCosm, the largest interactive collection of … tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of Science user facility at Berkeley Lab. Presented by Igor Grigoriev, …
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The Earth BioGenome Project 2020: Starting the clock
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… for Audio   ALISON:  Hey! I’m Alison Takemura at the US Department of Energy Joint Genome Institute, or JGI.  Two … meetings were still a thing, i.e. in January. She talked about her  Community Science Project proposal with JGI, in … that’s an example of a yucca species. And the cool thing about yuccas is that there are closely related species that …
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