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… A tall native plant of the North American prairie, switchgrass ( Panicum virgatum ) has long been a tantalizing potential biofuel feedstock. But switchgrass has a complex genome and, as a species, encompasses dizzying diversity. …

… high-performance computing resources, an upcoming hackathon led by the Oak Ridge Leadership Computing Facility (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … Oakridge National Laboratory Hackathon …

… JGI researchers demonstrate how their laboratory and data science efforts … to advance biotechnology. Mission  As a U.S. Department of Energy Office of Science user facility supported by the … Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, …

… Adriana Corales, Hugh Cross, Megan DeMarche, Joanne Emerson, Matthew Hudson, Megan Keller and Julia Kelliher; [below] … Annual Call. “It’s exciting to see the diverse portfolio of successful CSP proposals this year,” noted Tanja Woyke, … annual CSP call is focused on large-scale genomic science projects relevant to the DOE’s Office of Biological and …

… bioenergy crops The Science Scientists at Brookhaven National Laboratory (BNL) led a team that  identified a protein … Described as the “DOE Tree,” poplar is considered one of the  Flagship Plants for the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …

… Matt is broadly interested in the interactions between microbial life and environment, and using … interest. Matt also supports various CSP and FICUS user projects for the Metagenome Program. …

… Protein annotations provide insights into environmental tendencies The Science The  Metagenome Stability Diagram — a tool within the Integrated … and researchers more about the patterns and functions of environmental microbes. Researchers can use the tool to … The work conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office …

… key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user science and projects through implementation of advanced analysis …

… RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory … in Streptomyces coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our … coherent pieces called contigs — into genes and even into genomes — from these environmental samples,” said Matthias …

… Over the years, hundreds of interns have come to the JGI from all parts of the globe to gain lab experience and contribute to ongoing projects. In one way or another, they’ve all mentioned how …

… and graduate students to engage in real, impactful research projects with JGI mentors. In this episode, hear two interns … cohort describe their deep dives into genomics, computational tools, and big data.  …