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… issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer perspectives on what the next five … Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more … processes. A third approach steps away from reconstructing genomes directly from the environment and focuses on …

… On July 6, scientists from Lawrence Berkeley National … biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector representations of proteins in order to conduct more efficient protein sequence … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… fluctuates. The Science The Arctic microalga Plocamiomonas psychrophila can thrive in changing conditions. A … sequencing from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … changing salinity of the environment. ( The annotated algal genome is available on the JGI’s PhycoCosm data portal.) …

… Gene expression in eukaryotes was long held to be monocistronic – that … a single gene makes messenger RNA, which encodes a single protein. Gene expression in eukaryotes was long held to be … Laboratory, the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …

… shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main ingredients to … with researchers at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … RNA sequencing and alignment to the reference fungal  genome . The study’s pivotal NMR (nuclear magnetic …

… to welcome six to the Facilities Integrating Collaborations for User Facilities (FICUS) program for fiscal year … and other national user facilities. Focus areas for these projects include biofuels, biomaterials and bioproducts; … and multidisciplinary nature of DOE mission science projects, this proposal call aims to encourage innovative …

… This single environmental trigger highlights efficiency for users requiring … Researchers with the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … that precisely maps where transcription begins on the genome. This revealed a sweeping cellular response: The …

… Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field studies related to her thesis on cone snails, UC Merced graduate student Sabah Ul-Hasan …

… Matt is broadly interested in the interactions between microbial life and environment, and using … interest. Matt also supports various CSP and FICUS user projects for the Metagenome Program. …

… Protein annotations provide insights into environmental tendencies The Science The  Metagenome Stability Diagram — a tool within the Integrated … microbes. Researchers can use the tool to correlate protein annotations with ratios of DNA sequence fragments … The work conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office …

… bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user science and projects through implementation of advanced analysis pipelines and tools as well as …

… for our 2025 Community Science Program Annual Call. These projects include cutting-edge research into microbial … mats — to reveal how these systems adapt and contribute to global biogeochemical cycles. Additional … Deputy Director of JGI’s User Programs. “Many of these projects are large in scale and involve multiple …