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Green Algae Reveal One mRNA Encodes Many Proteins
… research team included scientists at the University of California (UC), Berkeley, UCLA, UC Davis, Brookhaven National … enabled by the “Facilities Integrating Collaborations for User Science” (FICUS) collaborative science initiative … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Webinar: Introducing the BioSANS capability
… The BioSANS instrument is at the Center for Structural Molecular Biology (CSMB) at Oak Ridge … instrument when applying to the FY2022 EMSL-JGI FICUS call for proposals. Presentations from: Scott Lea, EMSL’s Structural Biology Integrated Research Platform lead Hugh O’Neill, from the Center for Structural …
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Promoting the Power of Viral Metagenomics
… An article summarizing the field of viral metagenomics, authored by JGI researchers Lee Call,  Stephen … Since early 2020, people all over the world have been forced to confront the awesome power that viruses have to … some of the current challenges faced by those using metagenomics to try to understand the far-reaching impacts of …
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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… are at the heart of sustaining food and bioenergy security for a steadily growing worldwide population. Anuvia Plant … drive discoveries that will render new economic advantages for farmers concerned with improving sustainable soil … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… the Energy Sciences Network (ESnet) have been recognized for outstanding achievements in science, technology, and … Science user facilities. The HPCwire Editors Choice Award for Best Use of HPC in Life Sciences went to the Berkeley … assembly of environmental microbiomes.” JGI’s Chief Informatics Officer  Kjiersten Fagnan touted the long-standing …
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JGI announces first round of 2023 New Investigator awardees
… circle of researchers. That’s why twice each year we look for novel research projects — aligned with DOE missions and … Below find a list of the first 10 researchers accepted for 2023. Proposals are accepted year-round; the next review … will be conducted in March. You can also find  more information about the scientists and their proposals here .   …
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Soil virus offers insight into maintaining microorganisms
… to carbon cycling.  The Science Through a collaborative effort, researchers have identified a protein in soil viruses … impact on the microbial communities within soil. Using metagenomics, scientists can shed light on hidden components, … only to cellulose.  Chitin is also a common food source for microbes living within soil. So, the chitosanase protein …
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A Community Resource for Secondary Metabolite Researchers
… compounds shared by most living creatures for energy, growth and reproduction—most organisms produce a … (SMC) has launched as an interactive public database for the research community. With more than 13 million BGCs … biosynthetic gene clusters and secondary metabolites information from isolate and metagenome data.   The SMC ( …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… by minimizing flood risks and filtering water. Peat formed there over thousands of years sequesters more carbon … vegetation types in the world combined. Harvesting peat for energy has been increasingly discouraged due to … Berkeley National Laboratory, and the HudsonAlpha Institute for Biotechnology sequenced sphagnum  genomes from plants …
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An Automated Tool for Assessing Virus Data Quality
… virus sequences vary widely. In a previous effort, an international consortium recommended specific guidelines and best practices for characterizing uncultivated viruses. Following up on … which limits the ability of researchers to accurately perform functional assessment, host prediction, and …
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How Filamentous Fungi Sense Food
… Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct … hemicellulose. The Impact N. crassa is the model organism for filamentous fungi, all of which contain a wide array of … components present in plant biomass. This is of interest for bioenergy researchers looking to improve the industrial …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… For the first time, a team has comprehensively described … a more systematic picture through single-cell and metagenomic sequencing. A team co-led by Mária Džunková, … virus in 34 hosts or 26 percent of the single cells. Metagenomics sequencing then allowed the team to ask, for the 34 …
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