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A User-Centered Approach to Accessing JGI Data
… common set of metadata. For Steve Wilson, JGI’s Systems Engineering group lead, the Data Portal reflects a structural shift … the users with the standard  JGI Data Release Policy information when they request a download.  When we have a … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Promoting the Power of Viral Metagenomics
… An article summarizing the field of viral metagenomics, authored by JGI … some of the current challenges faced by those using metagenomics to try to understand the far-reaching impacts of … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… Multiple 2021 HPCwire Awards ” on the Berkeley Lab Computing Sciences site. Lawrence Berkeley National Laboratory … Lab), the National Energy Research Scientific Computing Center (NERSC), the DOE Joint Genome Institute (JGI), and the Energy Sciences Network … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Styling for Safety: PPE, It’s the JGI Way
… PPE or Personal Protective Equipment is worn to minimize exposure to hazards that can cause workplace injuries and illnesses.  PPE or Personal Protective Equipment is worn to minimize exposure to hazards that can cause workplace … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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JGI announces first round of 2023 New Investigator awardees
… The JGI is eager to work and share our tools with a widening circle of researchers. The JGI is eager to work and share our tools with a widening circle of researchers. That’s why twice each year we … will be conducted in March. You can also find  more information about the scientists and their proposals here .   …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… Sequencing technology has changed dramatically over the last  … to high-quality, assembled datasets from all of this information. The JGI aims to create pipelines, tools and other … research community can access and use to manage the information being generated across disciplines  These advanced …
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A Sorghum Pangenome Opens More Doors to Discovery
… Leveraging decades of technological development, dozens of … from a much broader view than ever before. With this information, researchers can link genetic variation more … In future work, a pangenome offers many more knowledge transformations — including understanding of traits we know …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… By characterizing the structure and function of a methylthio-alkane … reductase system, researchers could open avenues for using bacteria to produce ethylene and more.  Microbes excel at recycling the abundant miscellanea of their surroundings. Case in … Berkeley National Laboratory, is committed to advancing genomics in support of DOE Office of Science Biological and …
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Extracting the Secrets of Secondary Metabolites
… for survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and CRAGE technologies. While CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is the leading tool … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … will help solve energy and environmental challenges.   Scanning the California oak woodlands from the air, large swaths … al. Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis . Science. 2006 Sep …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… A nuanced understanding of peat moss drives insight into carbon storage   The Science Boggy peatlands, which … (A.J.S.) conducted by the US Department of Energy (DOE) Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office of …
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New Research Sheds Light on Diversity in the Deep Sea
… Microbial communities living near hydrothermal deep-sea vents hold vast potential for …   The Science Hydrothermal vents are ocean-floor openings in the Earth’s crust that emit hot, mineral-rich water. … and DBI-2047598 to K.A. We thank the Department of Energy Joint Genome Institute (Community Science Program award 339, …
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