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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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Identifying the Microbial Cleanup Crew at a Superfund Site
… Analysis reveals the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental Protection … Program , they were able to analyze the resulting metagenomic data. (Data from the project are available on the  … Partial support was provided by the National Center for Research Resources (NCRR) (5P20RR016480-12) and the …
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Axel Visel
… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the development and … genomes, which led to the discovery of thousands of genetic switches implicated in developmental and disease processes … Axel Visel is the JGI's Deputy for Science Programs. Click to learn more about our seven …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… For the first time in several years, the DOE Joint Genome Institute hosted several UC … Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant Growth … huge amounts of data. I was excited to work on fungal genomics and the fact that I got to do a project involving …
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Graduate Students Get Thesis Research Opportunity at the JGI
… Twice a year, the DOE Office of Science Graduate Student Research … is Mo Kaze, part of the 2018 cohort of the JGI-UC Merced Genomics Internship Program. Kaze is part of Mark Sistrom’s … to answer our most pressing problems. I’m very much looking forward to working with JGI and LBNL scientists and have …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… P. psychrophila genes drive resilience when salinity fluctuates. The … ice in the Arctic has decreased by more than 30% in terms of quantity and thickness. Replacing older, thicker ice with … manage the growth, yield and climate resilience of algae — for potential use as biomass or in biomass conversion to …
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The Case for Conservation
… How sex chromosomes “older than dinosaurs” could help improve crop yields.  The Science … genome . Now, high-quality reference genome sequences of the male and female plants, each representing a single … advances in sequencing technologies applied to the effort. The Impact Found on all continents, including …
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Crysten Blaby-Haas
… Dr. Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular … joint user capability between the JGI and Molecular Foundry for genome-encoded biomaterial discovery, design, and … working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging …
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JGI Workshop at SIMB NP Meeting
… Jan. 7: New Capabilities to Study Secondary Metabolism   … often tedious and resource intensive. This is often due to, for example, tight regulation of biosynthetic gene clusters … Science User Facility, has been developing and applying new genomics capabilities that address these issues. Check the …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… A genetic architecture that is characteristic of the sex chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in … This work was supported by the NSF Dimensions of Biodiversity Program … 2016YFD0600101), and the National Key Project for Basic Research (2012CB114504). The work conducted by the …
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JGI@25: Building a Better Bean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … in soil health through nitrogen-fixation and holds clues for maximizing soybean, the common bean’s close relative, as … Phaseolus as a test model quite frequently for R&D in plant genomics, because it is an inbred dicot,” Schmutz explained, …
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Toward More Efficient Artificial Photosynthesis
… Chloroplast mimic a platform to capture and utilize carbon in a … Lab). Supporting the Erb lab through the CSP Functional Genomics call, the JGI synthesized library of genes that … Aquitaine’ and by the French Government ‘Investments for the Future’ Programme, University of Bordeaux Initiative …
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