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Genome Sequence of Hybrid Vibrio cholerae O1 MJ-1236, B-33, and CIRS101 and Comparative Genomics with V. cholerae▿
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Mike Sneddon
… clinical cancer diagnostics company, where he led the Production Informatics team in delivering validated … M., and Yang, X. Metagenomic library and natural product discovery platform. WO2021163637A1 , PCT application … Emonet, T. Stochastic coordination of multiple actuators reduces latency and improves chemotactic response in bacteria. …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… genome with precise gene targeting transforms oil-producing alga into a powerful platform for developing ​​bio-based industrial products.    The Science Scientists have fully decoded the genome of an oil-producing green alga, and demonstrated precise gene targeting in …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… years, the DOE Joint Genome Institute hosted several UC Merced students this past summer. This year’s cohort for the JGI-UC Merced Internship Program was brimming with excitement … Theo Loreaux and mentors Simon Roux and Frederik Schulz, Structure Prediction to Annotate Novel Viruses: the Case of …
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Katherine Louie
… became Platform Lead where she manages metabolomics production for community sequencing projects and heads R&D efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … development of new, advanced mass spectrometry research products such as stable isotope probing (SIP) to assess …
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Refinement of the “Candidatus Accumulibacter” genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration
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Yasuo Yoshikuni
… focus includes engineering of non-model yeasts for production of biofuels and renewable chemicals, developing … sustainable and cost-effective biomass for production of renewable fuels and chemicals.  … non-model yeast, Issatchenkia orientalis, for production of citramalate., Metabolic Engineering Communications …
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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI researchers for … of being part of a research institute. It has also introduced me to a new career path of being a researcher in a …
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Tanja Woyke
… studying the mechanism of action of antifungal natural products and their derivatives during her Ph.D. in Microbiology … American Academy of Microbiology 2015 LBNL Women @ The Lab Award 2014 LBNL 2014 Director’s Award for Exceptional … Nature Protocols, Nature Reviews Genetics, ISME J, Nucleic Acids Research, DOE Small Business Innovation …
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Soil virus offers insight into maintaining microorganisms
… that break down chitin. A protein tree was then constructed with the sequence data to compare viral chitosanases … drift and diversification processes. The high-resolution structure of chitosanase was obtained at SLAC by irradiating … (JGI) and DE-AC05-76RL01830 (EMSL). The crystal structures were determined at the Stanford Synchrotron …
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, researchers … cycle carbon in changing conditions. The products of photosynthesis are easy to point out. Plants, algae … oxygen and sugars. How photosynthesis works, though, is much harder to pin down.  Photosynthesis appears to have a …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… how humans could do the same on an industrial scale to produce biofuels . Since one of the challenges of developing … subject that could lead to more sustainable energy production.  However, less than 10% of the microbes found in any … and now an associate professor and head of the Hess Lab at UC Davis. “It was a really huge effort in tool development …
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