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… the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the … an increased number of users with a record output of products, making data easier to access and use, and by investing … algorithms to identify billions of protein sequences in metagenomes.  We continue to engage with our user community …

… a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab) sequenced 1 … bases — a terabase — of soil RNA for this project, and produced the reference genomes that allowed for mapping these … the world. These tools give researchers a way to access much more information about fungi in these environments. “Now …

… a nanoscale research and knowledge-based user facility at Berkeley lab. She earned her PhD in Microbiology and Cell … From 2011 – 2015, she worked with Sabeeha Merchant at UCLA as a NIH Ruth L. Kirschstein National Research Service … Science, University of Florida NIH Postdoctoral Researcher, UCLA … Handling Editor, Journal Experimental Botany, 2022 – …

… improving their abilities to adapt to extreme environments such as poor soils and drought. The reference genome for  M. … programs of related candidate bioenergy feedstock crops such as sugarcane and sorghum. The  M. sinensis genome … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), and …

… based metabolomics Below is a table of standard product offerings, including a description of the product and … metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript sequence Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation of …

… major food crops and feedstocks for biomass and biofuel production. Learning about the ecology and evolution of  … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), has generated a … test, the team reported that the algorithm was over 95% successful at classifying the fungal genomes Support Vector …

… of contributing over one “petabase” – a quadrillion nucleotide bases of DNA sequence to the public data … scores of individuals, including JGI staff, Biosciences and Berkeley Lab leadership, the half-dozen JGI advisory … document widely within the Biosciences Area and among our Berkeley Lab colleagues, particularly with the other user …

… improving their abilities to adapt to extreme environments such as poor soils and drought. The reference genome for M. … programs of related candidate bioenergy feedstock crops such as sugarcane and sorghum. The M. sinensis genome … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), and …

… and how the mutualistic associations allow host plants, such as candidate  bioenergy feedstock crops, to acquire … genomes. With so many fungal  genomes , the team conducted a large-scale comparison, charting several changes … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). All of the …

… lead to sustainable pathways for making high-value bioproducts including biofuels. In addition, the team says that … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Researchers … expression on two energy-filled sugars used in biofuel production, glycerol and galactose. Although they are …

… where renewable, biological resources drive processes, products, and services.  Advancing the bioeconomy will provide a … including agriculture, climate modeling, novel bioproducts, and environmental remediation—all priorities … extensive input from all JGI staff, Biosciences and Berkeley Lab leadership, JGI advisory committees, and its …

… a DOE Office of Science user facility located at Lawrence Berkeley National Laboratory, have collaborated with global … in developing and managing public viral genomics resources such as analytical tools and data repositories to two … CheckV , which assesses the quality and completeness of metagenome-assembled viral genomes ( Nature Biotechnology , …