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Unveiling plasmid diversity in nature
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Phage–host coevolution in natural populations
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2022 Progress Report
… (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the …
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High‐density linkage map reveals QTL underlying growth traits in AP13×VS16 biparental population of switchgrass
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The JGI announces 2024 awardees for our Community Science Program annual call
Hannah Schulman, Bram Stone and Jana Voriskovaa The JGI is excited to announce the fifteen scientists selected … CSP proposals this year,” noted Tanja Woyke, who heads JGI’s User Programs. “These PIs have proposed research that …
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What Happens Underground Influences Global Nutrient Cycles
DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. Through … example, Sabeeha Merchant of the University of California, Berkeley studies the alga  Chlamydomonas reinhardtii , one … Calls … Environmental Molecular Sciences Laboratory Release: Proposal Calls … From our partners …
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16S rRNA Gene Amplicon Sequencing Data from Flooded Rice Paddy Mesocosms Treated with Different Silicon-Rich Soil Amendments
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The JGI announces FY25 awardees for our Community Science Program Annual Call
…   The JGI is excited to announce the 18 scientists selected for … CSP investigators,” said Tanja Woyke, Deputy Director of JGI’s User Programs. “Many of these projects are large in scale and involve multiple collaborators, bringing together diverse expertise to address …
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Matt Blow
Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis … and plasticity in bacterial gene regulation. Nature methods 18 (12), 1499-1505 Shulse et al. 2019. Engineered Root Bacteria Release Plant-Available Phosphate from Phytate. Appl Environ …
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Environmental Genomics Group
… approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and … Clum, A. et al. (2021)  DOE JGI metagenome workflow … Scales of Microbial Ecology . Trends Microbiol. 10.1016/j.tim.2019.03.003 Eloe-Fadrosh, Emiley A. et al. (2016)  …
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CalTeach
Receive mentorship, network and gain connections with lab staff. Increase their technical skills and confidence in …
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The Power of One, Amplified
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), employed … was then used to produce a paired amplicon dataset (a.k.a. 16S rRNA gene sequencing), a shotgun metagenome, and a …
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