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… The JGI is eager to work and share our tools with a widening circle of … results could bring key insights into how our planet’s nutrient cycles are regulated, and the ways organisms can …

… Meta-omics datasets show that CRISPR-Cas systems determine mutualism or parasitism between some archaeal hosts and … all of the chemicals they need to survive. To fill in their nutrient gaps, they must latch onto a larger host — often, a … Then, using metagenomes and metatranscriptomes generated by the U.S. Department of Energy (DOE) Joint Genome …

… Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team led by researchers at the University of California, Berkeley … of many transcription factors to better understand how nutrients are acquired and carbon is metabolized in …

… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were … such as candidate  bioenergy feedstock crops, to acquire nutrients. Additionally, these results validate how … The project was funded by the U.S. Department of Energy Joint Genome Institute, a …

… From left to right: [above] Olivia Ahern, Adriana Corales, Hugh Cross, Megan … our 2024 Community Science Program Annual Call. “It’s exciting to see the diverse portfolio of successful CSP proposals … biofuel and bioproducts production, global carbon and nutrient cycling, and biogeochemistry. You can learn more …

… Molecular Sciences Laboratory (EMSL) and the Joint Genome Institute (JGI) provide access to a variety of … tools that leverage stable isotopes to measure carbon and nutrient flux, and identify microbes assimilating labeled … Like others, our turnaround time has been impacted by the pandemic. 3. Q: What instrument / method does the JGI …

… Harnessing BER-funded data resources, researchers built an … community brings together the data resources enabled by the DOE Biological and Environmental Research (BER) … prokaryotes, including two bacteria isolated by their lab. KBase was used to rapidly assemble and …

… 2025 Community Science Program Annual Call. These projects include cutting-edge research into microbial communities — from freshwater estuaries reshaped by dam removal to Antarctica’s photosynthetic mats — to … biofuel and bioproducts production, global carbon and nutrient cycling, and biogeochemistry.  You can learn more …

… planet’s microbial diversity is immense, yet much of it remains unknown. For more than a decade, researchers around the … to define the current shape of the microbial tree of life by filling in genomic information for thousands of … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …

… common set of metadata. For Steve Wilson, JGI’s Systems Engineering group lead, the Data Portal reflects a structural … of ‘baseline metadata’ across the files that are submitted by each scientific program,” he said. “If each kingdom … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. …

… Collaboratory encourages user engagement. The Science In addition to the core set of "primary metabolites"—chemical compounds shared by most living creatures for energy, growth and … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence …