Search

… through the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data … Data that passes through a kingdom portal (assemblies + annotations) For IMG & Mycocosm: Data that is associated … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. …

… the computational efforts directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful completion of the Human Genome Project, Professor Dr. Rokhsar ’s team … Publications … Selected Publications …

… hydroxyapatite, a high-value biomaterial with a wide range of industrial applications. The team was led by researchers at two U.S. Department of Energy national user facilities – the DOE Joint Genome … Foundry researchers then performed imaging analyses, using several microscopy techniques to confirm that the …

… interactions between microbial life and environment, and using metagenomics to study these complex natural systems. … places that are considered to be inhospitable to humans are of particular interest. Matt also supports various CSP and FICUS user projects for the Metagenome Program. …

… analyzing the enzymes present in the complex organic matrix of the forest floor, a team of researchers have found that … able to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) … role that fungi can’t fulfill by fixing nitrogen and using it as an energy source. No fungi are known to be able …

… at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of California, … He contributed to the Human Genome Project and led annotation and analysis of diverse eukaryotic genomes, from … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …

… JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative … produced data automatically assembled and run through your annotation pipeline then added to PhycoCosm (if relevant)? … doesn’t necessarily agree, we also have a way to do manual annotation – not covered in these tutorials 6.  Q: On the …

… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … senior author of the study and head of the JGI’s Microbiome Annotation Group. Many of these bacterial and archaeal … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …

… Interns contributed to a number of projects, from refining lab protocols at the bench to … Bushnell Project:  Machine Learning Applications in Gene Annotation Masato Terasaki Mentor: Yumary Vasquez Project:  … Chemoreceptors for Neurotransmitter Sensing   Watch this short video below to see what some of the interns had to say …