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JGI Workshop at SIMB NP Meeting
… Jan. 7: New Capabilities to Study Secondary Metabolism   Although there are still a large number of secondary metabolites yet to be discovered and their biosynthetic logics to be understood, accessing these untapped metabolic …
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A More Intuitive Phytozome Interface
… plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version 13 will become the current, and only, version of Phytozome accessible as an interactive website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  v13, which …
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A User-Centered Approach to Accessing JGI Data
… year, it was only accessible through the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a common set … shift in data access. Users were previously limited to accessing data sets within groups, such as plants (via …
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JGI Launches Latest Strategic Plan
… “petabase” – a quadrillion nucleotide bases of DNA sequence to the public data repositories over its now 20-plus-year history. In 2019, the countdown has begun to the June …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… 6,900 researchers working in 21 fields.  Congratulations to the  2022 Highly Cited Researchers from the JGI … Those from the JGI whose publications rank in the top 1% by citations for field and publication year are: Igor … JGI’s IMG/M Data Portal were instrumental to  a study that looked into how soil viruses , and in particular a …
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Nikos Kyrpides
… Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of … Microbial Genomes and Metagenomes Program since 2011. Prior to joining the DOE Joint Genome Institute, Dr. Kyrpides led … Integrated Genomics Inc. in Chicago, IL. He did his postdoctoral studies with Carl Woese at the University of Illinois …
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Ian Blaby
… design and assembly, strain engineering and bioinformatic tool development/data analysis for synthetic biology and functional genomics. Prior to joining the JGI, he was a group lead at Brookhaven National Laboratory where he focused on functional genomics of phototrophs. …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… of viruses in the same drop—the vast majority not harmful to humans could be even larger. Viruses infect bacteria, … and they range in particle and genome size from small, to large and even giant. The genomes of giant viruses are on … cycles. “This is the first study to take a more global look at giant viruses by capturing genomes of uncultivated …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to living on a changing planet. Mo Kaze is a University of … Goer Five” and his subsequent book  Thing Explainer, Kaze took on the challenge of explaining her research using the …
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Charting Progress toward Professional Goals
… Select interns look back on meaningful lessons from their summer … at the JGI Berkeley Lab offers a variety of programs to help inspire and train the next generation of STEM … with an experienced researcher who serves as their mentor. By contributing to projects that will help them build …
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Picking Up Threads of Cotton Genomics
… Analysis reveals cotton genome stability across global lineages . Come harvest time, the cotton fields look like popcorn is literally growing on plants, with … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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Pinning Down a Piece of Photosynthesis
… a cyanobacterial protein, researchers have new insights into how these ocean photosynthesizers cycle carbon in changing conditions. The … questions about structure and function,” Blaby-Haas said.  Looking at blueprints in high-throughput This work builds on … User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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