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Bioinformatics Analysis Tools for Studying Microbiomes at the DOE Joint Genome Institute
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The JGI announces FY25 awardees for our Community Science Program Annual Call
…   The JGI is excited to announce the 18 scientists selected for … CSP investigators,” said Tanja Woyke, Deputy Director of JGI’s User Programs. “Many of these projects are large in … as our smaller-scale New Investigator and Functional Genomics calls, here on our website.   See below for the full …
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Natural Prodcast Episode 2: The Primer, Part 2
… have that goal. That’s not as much our goal here at the JGI – we are not a medicinally focused organization. And so, … why we are still sequencing lots of stuff, and why the JGI is a key driver in some of the science. ALISON: Very … projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural products in plants, fungi, …
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Micro-Scale Applications Group
… information with individual cells. Research Team    … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal analytical standards … such as, “who is eating what?” and “who is active? … The JGI provides users access to cutting-edge cell sorting, DNA …
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Multi 'omics comparison reveals metabolome biochemistry, not microbiome composition or gene expression, corresponds to elevated biogeochemical function in the hyporheic zone
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AmiGO: online access to ontology and annotation data
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FinisherSC: a repeat-aware tool for upgrading de novo assembly using long reads
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Integrative visual omics of the white-rot fungus Polyporus brumalis exposes the biotechnological potential of its oxidative enzymes for delignifying raw plant biomass
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Green Algae Reveal One mRNA Encodes Many Proteins
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Lab and the Environmental Molecular Sciences Laboratory (EMSL), a DOE Office of Science user facility. The work was … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Berkeley National Laboratory, to create the database. JGI provided metagenome and metatranscriptome sequences, as … at the Environmental Molecular Sciences Laboratory (EMSL), a DOE Office of Science user facility at Pacific …
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Sequencing and functional validation of the JGI Brachypodium distachyon T‐DNA collection
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The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions
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