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Sequencing of diverse mandarin, pummelo and orange genomes reveals complex history of admixture during citrus domestication
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Integrating Experimentation with Data
…   Join the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory … data integration and modeling This three-day joint user meeting will feature insightful presentations, dynamic … Biological and Environmental Research (BER) program.   … About the Organizers … Stefani Ferreira , administrative …
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From Competition to Cooperation
… walls, while brown rot cannot break down the lignin but use cellulose. Finally, there are soil saprotrophs, which … in moving toward functional genomics studies to learn more about the inner workings of plant-host and … Large-scale genomics sheds light on the evolutionary history of mutualistic forest-dwelling fungi … Datasets … …
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Nick Everson
Lab Automation, and Administration departments. He previously served as JGI’s Business Manager from 2007 to 2012, overseeing all financial and logistics activities.  He … Lab in this UC-wide staff advocacy group … Education … About the JGI Deputy Director of Operations … Awards and …
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Webinars on Offerings & Capabilities
… here . You can find additional webinars covering how to use our data portals here.  … … Shining a Light: Advanced … Photon Source when applying to the FICUS call. (Feb. 21, 2024) More JGI webinars below …
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Coral life history and symbiosis: Functional genomic resources for two reef building Caribbean corals, Acropora palmata and Montastraea faveolata
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Sequencing and functional validation of the JGI Brachypodium distachyon T‐DNA collection
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
Science In a recent  Nature Genetics paper , researchers focused on the full composition of genes, or pangenome, of the … Summary As the planet has changed, so have plants. Curious about their ability to adapt to changing environments, … genome, which is key to understanding its full evolutionary history. Through studies of the  Marchantia pangenome, …
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and … to complete large-scale sequencing projects, including 10,000 Actinomycetota strains and 10,000 type strains. These … diversification and microbial diversity. Learn more about this work and further details on our Genomic …
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Fungal & Algal Program
… to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing … biocontrol agents dramatically affect plant health. The  1000 Fungal Genomes Project is a five-year project to … an international research team in collaboration with the JGI. Conserved Fungal Genes of Unknown Function offer a …
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Viral Genomics Group
… however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at improving … group . Research Team … Coclet, C. and Roux, S. (2021) Global overview and major challenges of host prediction … 4 , 1895–1906 Roux, S. et al. (2019) Minimum Information about an Uncultivated Virus Genome (MIUViG).  Nature Biotech …
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of … public database for the research community. With more than 13 million BGCs in the catalog at the time of publication, … of the closest comparable database. … Dan Udwary talks about the Secondary Metabolism Collaboratory  … Browse BGCs …
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