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Computationally Classifying Fungal Lifestyles
… major food crops and feedstocks for biomass and biofuel production. Learning about the ecology and evolution of  … at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility … conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… greenhouse gas, regulate Earth’s climate. Most methane is produced in environments without oxygen through a process … enabled by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility … Euryarchaeota .  Finding Methane-Making Microbes with Metagenomics  By leveraging metagenomics to sample the entirety …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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A Community Resource for Secondary Metabolite Researchers
… shared by most living creatures for energy, growth and reproduction—most organisms produce a set of "secondary … or tools. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility … the JGI, like IMG-ABC, and other academic efforts, SMC is already the most comprehensive BGC database available at 10X …
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Tracking the Origins of Methane-Producing Microbes
… Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane Metabolism. Methane-producing archaea are estimated to produce 500 million tons … the Emerging Technologies Opportunity Program (ETOP). Following that work, they partnered once more with JGI Microbial …
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Gene Expression: From On-Off Switch to Dial
… lead to sustainable pathways for making high-value bioproducts including biofuels. In addition, the team says that … at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility … expression on two energy-filled sugars used in biofuel production, glycerol and galactose. Although they are …
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iPHoP: A Matchmaker for Phages and their Hosts
… like  carbon fixation , nitrogen cycling and methane production. Meanwhile, environmental viruses are constantly … by scientists at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence … conducted by the U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office of …
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New Research Sheds Light on Diversity in the Deep Sea
… how life thrives in extreme environments. They also produce a range of novel enzymes and other biomolecules that … new biotechnologies around clean energy,  biofuels and bioproducts.  Summary Hydrothermal vents are typically found … Scientists with the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility … study. Members of the Tel Aviv and NCBI teams, who were already working on mining prokaryotic viruses together, … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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An Addiction Crucial to a Fungus’ Reproduction
… relies on bacteria to regulate key components of its reproductive machinery The Science To better understand how … living within a host (endosymbionts) have on fungal host reproduction, and the reproductive genes they regulate. The … at Cornell University and scientists at the Joint Genome Institute, a DOE Office of Science User Facility was …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… the Environmental Protection Agency declared the North Railroad Avenue Plume (NRAP) a Superfund site. The chemical PCE … by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility … ) conducted by the U.S. Department of Energy Joint Genome Institute (JGI) ( https://ror.org/04xm1d337 ), a DOE Office …
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Honey Bee Gut Microbiota Divvy Up Dinner
… enzymes. Honey bees rely on their gut microbiota to produce these enzymes to break down polysaccharides. But … can potentially dig in, even if they were too lazy to produce the enzymes themselves. One other finding that … with the help of the US Department of Energy Joint Genome Institute.     …
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