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Exploring the Diversity of the American Prairie’s Switchgrass
… American prairie, switchgrass ( Panicum virgatum ) has long been a tantalizing potential biofuel feedstock. But switchgrass has a complex genome and, as a species, encompasses dizzying diversity. …
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Extracting the Secrets of Secondary Metabolites
… biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not essential for growth … Repeats) is the leading tool for accurately editing genomes, its effectiveness has historically been limited due … CRAGE (Chassis-independent Recombinase-Assisted Genome Engineering) is a technique researchers can use to …
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Janey Lee
… Janey provides support for custom single-cell user projects and projects within the group. …
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome Institute. His team of engineers and scientists … the data and compute platforms and bioinformatics annotation pipelines that support JGI’s portals, tools, and the …
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How Maize Makes An Antibiotic Cocktail
… a family of compounds that protects it against infections — using surprisingly few enzymes. The Science Maize ( … protect maize by fending off fungal and microbial infections. Scientists had assumed that maize synthesizes these … synthesized by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Simon Roux
… in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to identify virus sequences, the design of new … Pascal, France Ph.D. in Bioinformatics, Ecology and Evolutionary Biology, Université Blaise Pascal, France …
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Integrating Experimentation with Data
…   Registration for this meeting has closed           Registration fees:                   General attendees: $500    … $250     Industry: $700    Thanks for joining the Joint Genome Institute (JGI) and the Environmental Molecular … are U.S. Department of Energy (DOE) Office of Science national scientific user facilities dedicated to advancing …
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2025 Progress Report
… JGI researchers demonstrate how their laboratory and data science efforts support users, advance foundational science and enable biotechnology discoveries. (Pictured … Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, …
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VEGA Symposium
…   Register here  Registration fees:  Early Bird rates available now General & Berkeley … – $300 Students & Postdocs – $250   Hosted by the DOE Joint Genome Institute, the 5th Viral EcoGenomics and Applications (VEGA) symposium will take place November 18-19, 2026 on …
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JGI Early Career Researchers Featured in mSystems Special Issue
… issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer perspectives on what the next five … Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more … processes. A third approach steps away from reconstructing genomes directly from the environment and focuses on …
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Accelerating Metagenomics Discoveries with Deep Learning
… On July 6, scientists from Lawrence Berkeley National … biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector … to vectorize protein sequences. Sevim is part of the JGI Genome R&D Group and is one of more than 100 scientists and …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… fluctuates. The Science The Arctic microalga Plocamiomonas psychrophila can thrive in changing conditions. A … sequencing from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … changing salinity of the environment. ( The annotated algal genome is available on the JGI’s PhycoCosm data portal.) …
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