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… In honor of the JGI's 25th anniversary in 2022, we have … year, the JGI team reported the first closed and finished genome derived from an uncultured bacterial single cell – a … oil plume from Deepwater Horizon oil spill led to a draft genome of the first deep-sea, oil-eating bacterium from a …

… A preview of how large-scale single cell genomics complements metagenomics studies. The … mobile genetic elements that were missed within paired metagenome assembled genomes (MAGs), and that dominant populations varied with … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …

… a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, … lysogeny, they can insinuate themselves inside the host’s genome, living quietly and replicating with their host … researcher at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …

… A. Estrada-Graf, Nicole M. Fernandez; [Row 2]: Zachary Garvin, Chandan Kumar Gautam, Gareth Gillard, Audrey Goeckner, … N. Zepernick.    Each year, the JGI solicits novel research projects from PIs who have not led any previously accepted … including metagenomics, metatranscriptomics and genome assembly to investigate microbial and plant …

… Nandita is involved in developing new methods to improve genome recovery from single cells …

… a crop that could boost biofuels and fertilize fields. So in 2010, the JGI helped publish the original genome sequence for the soybean, Glycine max. With a full genome sequence, researchers have been able to look into …

… Danielle operates the single-cell genomics pipeline for JGI collaborators. This work combines custom flow cytometric analysis, cell sorting, genome amplification, PCR screening, and 16S sequencing. She …

… Collaboratory encourages user engagement. The Science In addition to the core set of "primary … over 1.3 million publicly available bacterial and archaeal genome and contig sources.  The Impact Secondary metabolites … or tools. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …

… Sequence-based studies — from metagenomics to single-cell work — have quickly accelerated understanding of … Nucleocytoviricota , these giant viruses boast larger genomes than many bacteria. Until recently, understanding of … culture-independent approaches to gain insight into the  genomes of giant viruses. In a new review, researchers from …

… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has … BS, Engineering, Tokyo Institute of Technology Master's, Biotechnology, University … Kunakom S, Otani H, Udwary DW, Doering DT, Mouncey NJ. Cytochromes P450 involved in bacterial RiPP biosyntheses. J Ind Microbiol …

… Kaushal Sharma, one of five Antioch High School rising juniors who participated in internships at the DOE Joint Genome Institute this summer through the Biotech Partners … the version 6 data updates and feature enhancements to the Genomes OnLine Database (GOLD) administered by the DOE JGI. …

… Microbial communities living near hydrothermal deep-sea vents hold vast potential for … communities around these vents survive in very hot, high-pressure and chemically-rich ecosystems. This means they … Scientists with the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at …