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… archaea and eukaryotes, and they range in particle and genome size from small, to large and even giant. The genomes … . The team mined more than 8,500 publicly available metagenome datasets generated from sampling sites around the … As a result, the giant virus protein space grew from 123,000 to over 900,000 proteins, and virus diversity in this …

… change. Researchers at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … HudsonAlpha Institute for Biotechnology sequenced sphagnum  genomes from plants selected by a team from Duke University, … in hummocks, and others that preferred the hollows. Those genome sequences showed not only that the sex of a sphagnum …

… combines custom flow cytometric analysis, cell sorting, genome amplification, PCR screening, and 16S sequencing. She …

… Berkeley Lab Employees and Affiliates. When: August 29th, 3:00 pm – 5:30 pm 3:00 pm – 4:15 pm: Panel discussion, Q&A … Hoppy Hour @ Calicraft Brewing, Walnut Creek Where:  Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek … Road company) Hosted by Nigel Mouncey, Director, DOE Joint Genome Institute Read a synthesis from the panel discussion  …

… (CSP) call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … resulting from 95 letters of intent. For the first time, 63 percent of the accepted proposals come from investigators … evolved into a full-scale proposal known as the Brassicales Genome Initiative. Brassicales is represented by more than …

… public database for the research community. With more than 13 million BGCs in the catalog at the time of publication, it … over 1.3 million publicly available bacterial and archaeal genome and contig sources.  The Impact Secondary metabolites … and secondary metabolites information from isolate and metagenome data.   The SMC ( smc.jgi.doe.gov ) is designed …

… with different lifestyles. The Science The bacterium SAR324 is unusually cosmopolitan. In the ocean’s North Pacific … periodically at different depths. In order to determine the genome structure of SAR324 cells and their gene expression, … community genomes and expressed gene transcripts (metagenomes, metatranscriptomes), as well as the genomes of …

… Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems … Over the last year, the U.S. Department of Energy Joint Genome Institute has continued its journey to realize our … secondary users who made use of our data. We completed 39,870 projects in FY24 We generated 871 Terabases of …

… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying … bacterial RiPP biosyntheses. J Ind Microbiol Biotechnol. 2023 Feb 17;50(1):kuad005. Otani H, Udwary DW, Mouncey NJ. … of transcriptional machineries. Nat Commun. 2022 Jun 17;13(1):3502. Udwary DW, Otani H, Mouncey NJ. New keys to …

… juniors who participated in internships at the DOE Joint Genome Institute this summer through the Biotech Partners … described his student’s contributions as reviewing close to 3,800 metagenomes to verify geographic locations and assign latitude …

… Scientists with the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, contributed metagenomic sequencing to the study as well as  genome analysis, providing authors a more complete picture …

… pdfs of previous Progress Reports from the Joint Genome Institute.  … FY13 Progress Report …