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New and Improved: Eucalyptus Reference is Now Accessible
… eucalyptus genome assembly generated using advanced technologies to reconstruct the complete sequences of … eucalyptus species. The researchers are already working toward a eucalyptus pangenome to better understand the genetic …
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Kjiersten Fagnan
… focus on adapting JGI workloads to run on supercomputing hardware and worked closely with staff to understand the … workshops. In 2018, Dr. Fagnan was part of the Gordon Bell prizewinning team at the Supercomputing … and Information Technology Research and Development (NITRD) Program Chair of the Bike East Bay Board of Directors …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… to advancing genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. The JGI provides integrated high-throughput …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… a group of plants in the Agave family with fleshy, sword-like leaves, often with spikes along their edges. … to advancing genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. The JGI provides integrated high-throughput …
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Pinning Down a Piece of Photosynthesis
… and sugars. How photosynthesis works, though, is much harder to pin down.  Photosynthesis appears to have a lot in … Source II, and SLAC National Accelerator Laboratory’s Stanford Synchrotron Radiation Light Source.  “DOE has some … domain, looking for context clues that might point them toward the domain’s function. They found many instances of this …
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How to Target a Microbial Needle within a Community Haystack
… sequences can be even more challenging. To overcome this hurdle, a team led by Bernhard Fuchs and his postdoctoral researcher Anissa Grieb at the … of this protocol was enabled by the JGI’s  Emerging Technologies Opportunity Program . The ETOP helps …
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An Automated Tool for Assessing Virus Data Quality
… data quality. The Science Through advances in sequencing technologies and computational approaches, more and more …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… of genome biology, and develop genome-scale engineering technologies to control plants and microbes for bioproducts … Biological and Environmental Research program under award no. DE-SC0023027 (to SSM and JLM) with support from the Gordon and Betty Moore Foundation (to SSM) for the work on  A. …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… but you don’t need to necessarily just add samples in order to max out the gigabase allocation. Q: Can PhD … requesting? A: The reviewers do look at the PI’s track record to make sure that they have already worked with this type … to advancing genomics in support of DOE missions related to clean energy generation and environmental characterization …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… carbon and nitrogen cycles, break down plant mass (think biofuels ), enhance plant health, cause diseases, and produce … in the gaps,” she added. DSMZ not only preserves a standardized culture collection of international renown, from … to advancing genomics in support of DOE missions related to clean energy generation and environmental characterization …
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Taking Stock of the Known and Unknown Microbial Space
… Over the past few decades, advancements in sequencing technologies have led to an abundance of microbial genomes … microbial diversity we know about, and proposes a path forward to curate and cultivate what is still unknown.  “We took … to multiple research areas including agriculture, biofuels and bioproducts, and medicine. Wading through 30 years …
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The Power of One, Amplified
… remain unknown. In recent years, advances in sequencing technologies and bioinformatic tools have helped decode the …
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