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Products
… Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of the product and deliverables as well as target cycle … metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript sequence …
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Genomic profiles of four novel cyanobacteria MAGs from Lake Vanda, Antarctica: insights into photosynthesis, cold tolerance, and the circadian clock
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The More the Merrier: Making the Case for Plant Pan-genomes
… plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many … including agricultural staples and candidate bioenergy feedstock crops, are recent polyploids. Crop breeders have … de Aula Dei (EEAD-CSIC) (Spain); Fundación ARAID (Spain); University of California, Berkeley; Gregor Mendel Institute …
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JGI at the AGU Fall Meeting
… Register for the meeting here. Here are some sessions of interest (all times in PST unless otherwise noted): … am Convention Center eLightning Theater IV: Kuno Kasak, University of Tartu (lightning talk): “Wetland Restoration … Center, Rm 231-232: Josue Rodriguez-Ramos, Colorado State University (short talk): “Microscopic time travelers: A …
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A User-Centered Approach to Accessing JGI Data
… through the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data sets through a common set of metadata. For Steve Wilson, JGI’s Systems Engineering … ). “We have made a concerted effort to create a common set of ‘baseline metadata’ across the files that are submitted …
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Variation in Adult Plant Phenotypes and Partitioning among Seed and Stem-Borne Roots across Brachypodium distachyon Accessions to Exploit in Breeding Cereals for Well-Watered and Drought Environments  
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JGI Welcomes New UEC Members
… affect users and their access to technical capabilities JGI offers, as well as proposal review procedures and the … a breadth of institutions, research topics and career stages. The election period concluded on October 21. The … three new UEC members. They are: Kathleen Greenham of the University of Minnesota, Matthias Hess of the University of …
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Charting Progress toward Professional Goals
… from their summer experiences at the JGI Berkeley Lab offers a variety of programs to help inspire and train the … program, while Oliver Benelli applied through the University of California's  CalTeach initiative. During … My name is Sally Liao. I am a rising junior at Northwestern University. I'm in the SULI program, and I'm studying …
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Webinar: PhycoCosm Tutorial
… JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative … on, there are 7 genomes on NCBI but your portal has only 2 of them. A: Watch the video (above) for the answer provided … would it be possible to add a feature to look for synteny of the target genome with itself, to identify regions that …
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Annual Genomics of Energy & Environment Meeting
… the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & Environment Meeting! The JGI convenes this … goals. Keynotes: M. Francesca Cotrufo, Colorado State University N. Louise Glass, UC Berkeley Ian Foster, Argonne National Laboratory Sue Rhee, Michigan State University   …
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Webinar: Introducing the BioSANS capability
… Molecular Biology at ORNL Himadri Pakrasi, Washington University in St. Louis on “Solar Energy Conversion in Cyanobacterial Membranes” Marcus Foston, Washington University in St. Louis on “Integrated Multi-omics Analyses for the Prediction of Metabolic Flux in. Lignin Conversion”       …
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Nikos Kyrpides
… 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in … IL. He did his postdoctoral studies with Carl Woese at the University of Illinois at Urbana-Champaign and at Argonne …
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