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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, fungi, viruses — to support scientists …
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New Research Sheds Light on Diversity in the Deep Sea
… and repair themselves or eliminate waste. The Impact The bacteria, archaea and other microorganisms of the microbial … shrimp and crabs also live near these vents, feeding on the bacteria and other microorganisms that live there.  … They identified 511 new or recently discovered genera of bacteria and archaea. Many of the samples shared a high …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… from a local dry-cleaner. Researchers  identified two bacteria,  Dehalococcoides mccartyi and  Dehalobacter … sequencing and analysis, the researchers identified other bacteria and microbial processes that support PCE …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… interested in better characterizing the role endosymbiotic bacteria play on mating habits of Mucoromycota fungi, and … have beneficial symbiotic relationships with plants and bacteria; in many instances, fungal physiology is impacted by these bacteria during mating processes. Kathryn Bushley of the …
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JGIota: Looking Back at Methane-Making Microbes
Those emissions mainly come from gut microbes — the bacteria and archaea breaking down plant matter. So since …
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Crysten Blaby-Haas
… on using comparative genomics to predict gene function in bacteria and leveraging molecular biology and reverse … site ties heme availability to carbon metabolism in cyanobacteria. Nature Comm 15:3167. Hammack AT, Blaby-Haas CE. …
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Supercharging SIP in the Fungal Hyphosphere
… stable isotope probing helps ID novel interactions between bacteria and fungi The Science Researchers have successfully … fungi, researchers identified novel interactions between bacteria and the fungi. The Impact Stable isotope probing is … identified a wide variety of microbes, including both bacteria and archaea, actively engaging with the fungi — …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… first closed and finished genome derived from an uncultured bacterial single cell – a symbiont of the green … populations in oxygen minimum zones identified SAR11 bacteria as initiators of nitrogen loss in these waters. The top image on the left shows how, from a single bacterial cell (seen here in a glass capillary), researchers …
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Finding the Fermenters
… called fermentation. To better understand the range of bacteria and archaea that rely on this form of metabolism, … five previously uncharacterized prokaryotes, including two bacteria isolated by their lab. KBase was used to rapidly …
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Bacterial Microcompartments
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… awarded the van Niel International Prize for Studies in Bacterial Systematics for the triennium 2017-2020! …
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2025 NeLLi Symposium
… together to develop recommendations for cultivating new Bacteria and Archaea revealed by a recent genome census . … This symposium series will provide an overview of the bacterial, archaeal and microeukaryote diversity cataloged …
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