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… Questions about the transition from Phytozome v12 to v13. Why is it necessary to retire Phytozome v12? The codebase … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …

… to climate change and devastating fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …

… at the University of California, San Diego. As the Sequencing Technology Implementation Lead, he directs a … and plants. His team is also developing single-nuclei sequencing methods to characterize gene regulation at the … and Timothy J. Donohue. "Using DNA affinity purification sequencing (DAP-seq) to identify in vitro binding sites of …

… Program , the JGI enables large-scale synthesis support, sequencing, integrative -omics, and data mining, empowering … called terpenes. Terpenes are made via a tangled network of enzymes in plants. To better pinpoint the biosynthetic … applications — are evolving. “JGI is famous for its work sequencing human and environmental genomes. But we now have …

… The JGI is not a funding organization. Rather, it makes its sequencing, synthesis, metabolomics and data analyses … themselves for example using GNPS. Q:  Since the enzymes are doing the heavy lifting to make the metabolites, … transcriptome analysis and 8 replicates for metabolomics. Why is this? A:  We did a pilot experiment with the JGI to …

… over a billion years of evolution offers catalogs of enzymes, secondary metabolites, and other parts lists for … paper highlights how fungi produce "an incredible array of enzymes and secondary metabolites, many of which hold great … toward 10,000 fungal genomes and beyond will yield novel enzymes and metabolites, enable prediction of fungal traits …

… relationships outside of the root cells) lineages. To learn why, researchers analyzed 135 fungal genomes representing … For example, the number of plant cell wall-degrading enzymes such as ligninases and cellulases were much lower in …