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Protocols
Find protocols provided by JGI and the JGI user community below for DNA preparation tools, high … extraction and RNA preparation.  JGI sample QC protocols can be found here . DNA Extraction Protocols: … Tips for …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … tools created by JGI researchers, including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… this short audio production, we’ll hear from Ed Hall, an ecologist at Colorado State University in Fort Collins. He’s … JGI-supported project studying the world’s rivers and their microbial communities. He’s focusing on the Arkansas River … And that led me to get even more interested in how general environmental stressors, um, alter microbial biomass …
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Horizontal Transfer of Entire Genomes via Mitochondrial Fusion in the Angiosperm Amborella
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Expansion of Thaumarchaeota habitat range is correlated with horizontal transfer of ATPase operons
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Better Genome Editing for Bioenergy
… part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput gene-editing tool that can help scientists engineer … applications. Cas9 needs guide RNA to lead it to the correct sequence to snip — but not all guides are effective. …
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Doubling Down on Known Protein Families
Using a novel computational approach, researchers confirm microbial … sequencing allows researchers to study the entire genetic makeup of these communities via whole genome …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … tools created by JGI researchers, including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for …
Learn more
CSP Large Scale Call
The Community Science Program Large Scale Call is focused on … to unravel functional capabilities of plants, microbes and microbial communities, global carbon and nutrient cycling, … and track record of the applicant.  Learn about the general review process or get details on the internal …
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Lipid analysis of CO2-rich subsurface aquifers suggests an autotrophy-based deep biosphere with lysolipids enriched in CPR bacteria
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Identifying the Microbial Cleanup Crew at a Superfund Site
Analysis reveals the microbial community involved in a bioremediation effort. The Science … (NCRR) (5P20RR016480-12) and the National Institute of General Medical Sciences (NIGMS) (8 P20 GM103451-12) from …
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A Plant Root Atlas for Tracking Developmental Trajectories
A collaborative team led by Geoffrey Schiebinger at the … Universität zu Berlin   has developed an atlas that maps gene expression patterns in the  Arabidopsis root, profiling … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …
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