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Nigel Mouncey
… the fourth Director in its 27-year history. He has a wealth of managerial experience from almost 20 years in the … international forums. Breaking the Wall of Environmental Genomics … Jensen, R. O. et al. 2024. Phylogenomics and … World Bio Markets Bio-based Business Person of the Year Publications Committee Chair (2016- ), Society for …
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A One-Stop Shop for Analyzing Algal Genomes
… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … greater bioeconomy. By bringing together publicly available genomic data on algae into one place, PhycoCosm allows users … sequence and understand. A team of researchers led by Algal Genomics Program lead Igor Grigoriev and data scientist Alan …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… analyzing the enzymes present in the complex organic matrix of the forest floor, a team of researchers have found that there is a striking division … work was supported by the Czech Science Foundation (18- 25706S and 20-02022Y), by the Ministry of Education, Youth …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… a new methodology, scientists are now getting more complete genomic results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for understanding the … like plasmids, the picture is far from complete.  In 2021 , scientists at St. Jude Children’s Research Hospital …
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A Complex Confection Decoded: Sugarcane Reference Genome
… most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the … the HudsonAlpha Institute for Biotechnology and the Arizona Genomics Institute. The work was partly enabled by the JGI’s Community Science Program; in 2018, a monoploid reference sequence of sugarcane …
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Accelerating Metagenomics Discoveries with Deep Learning
… in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing data … insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms … networks found in nature, allows machines to “learn” features. State of the art algorithms can perform …
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Matt Blow
… as a research scientist on projects to develop functional genomic technologies and to understand genome function in bacteria. Since 2016, he has been the lead of the User Support Analysis group. The group performs … board member for Scientific Reports … Education … Selected Publications … Awards and Service …
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I-Min (Amy) Chen
… data modeling, and biological data management. She was one of the co-authors and key developers of the Object-Protocol … and analysis system v.7.0: content updates and new features. Nucleic acids research Jan 2023 Camargo AP, … in an Academic Setting, SSDBM 14, July 2014 … Selected Publications …
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JGI Mural
The JGI mural on the 3rd floor of the Integrative Genomics Building whimsically references … The two-story JGI mural was commissioned for the JGI’s 25th anniversary and done by Berkeley-based artist Nigel …
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Tanja Woyke Elected to American Academy of Microbiology
Tanja Woyke , who has been elected to the American Academy of Microbiology (AAM) ! She is among the 68 new Fellows in … Laboratory (Berkeley Lab), Woyke has led JGI’s Microbial Genomics Program since 2009 and heads the Single Cells … evolutionary relationships and leading to the discovery of features such as a new genetic code. More recently reported …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… their collaborations. One review article in the collection, Genomics-enabled analysis of specialized metabolism in … more than 10 papers, including two Nature Plants publications, in five years, have come out of the … relationships with machine learning, they predicted key features of the enzymes, including particular amino acid …
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JGI Workshops at PAG
Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With …
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