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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 Symposium” delving into the most recent expansions of the Tree of Life and latest discoveries toward the …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Survey of Setaria's natural diversity reveals seed dispersal in wild … Center (Danforth Center) drove up and down the highways of the continental United States, occasionally pulling over … because they’re very productive even in high heat while C3 crops have become less efficient at photosynthesis, a …
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Learning to Look
Machine learning approach significantly expands inovirus … “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … By the numbers, the new approach detected inoviruses in 3,609 (6 percent) of the 56,868 microbial genomes and 2,249 …
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Doubling Down on Known Protein Families
Using a novel computational approach, researchers confirm … big the room is.  A new study  published online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach …
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Pinning Down a Piece of Photosynthesis
By studying the structure and function of a cyanobacterial protein, researchers have … cycle carbon in changing conditions. The products of photosynthesis are easy to point out. Plants, algae and …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint … genome, the genome predicts they often can produce around 30 – more than 30 compounds. So, this was a complete …
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How Filamentous Fungi Sense Food
Tracing gene regulatory networks in the model fungus  … . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … under US Department of Energy Contract DE-AC02-05CH11231, a Joint Genome Institute Community Science Program grant …
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Natural Prodcast Episode 15: Katherine Duncan
… … Dan Udwary: Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today … here today, and we wanted to talk to her about a whole list of things. So we have a Scripps background shared together, … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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Integrating Experimentation with Data
…   Join the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) … to stay informed … The JGI and EMSL are U.S. Department of Energy (DOE) Office of Science national scientific user … omics-based and analytical characterization, imaging, and visualization, through a collaborative, peer-reviewed …
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Dan Rokhsar
Dr. Rokhsar joined the DOE Joint Genome Institute in 2000 as the … directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful completion of … IBM Watson Research Center, Yorktown Heights, NY … Publications … 2018 Marthella Foskett Brown Chair, …
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with … with light availability. A long-running time-series study offers a first glimpse into a full season’s cycle of this … found that the green sulfur bacteria population spiked to 83%, only to dramatically fall to 1% in early spring and …
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JGI-KBase Panel at SACNAS
Nov. 2: Getting Credit for Scientific Contributions of Any Size What is considered to be a scientific contribution? … students (and their mentors) how to begin establishing a professional presence through getting credit for any …
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