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Kjiersten Fagnan
… closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in 2016, and in 2018 was hired to be the JGI’s … Methodologies workshops. In 2018, Dr. Fagnan was part of the Gordon Bell prizewinning team at the Supercomputing …
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2024 Progress Report
… the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the … for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic … A record number of primary users — 2,456 — had active proposals with us, …
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Three Join the JGI User Executive Committee
… three new members earlier this month – Sneha Couvilion of Pacific Northwest National Laboratory, Chris Schadt of … National Laboratory and Elizabeth “Lizzy” Wilbanks of the University of California, Santa Barbara. They join eight other JGI users …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), played a … Zhanao Deng, an environmental horticulture scientist of the University of Florida (UF) Institute of Food and …
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Crysten Blaby-Haas
… Dr. Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a partnership … a nanoscale research and knowledge-based user facility at Berkeley Lab. She is spearheading the development of a joint … her PhD in Microbiology and Cell Science in 2011 from the University of Florida, working with Valérie de Crécy-Lagard …
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Matt Blow
… from the Wellcome Trust Sanger Institute and Cambridge University University in 2005, where he studied RNA editing and cancer … BS in Biochemistry and Biological Chemistry, Nottingham University, UK PhD in Genomics, University of Cambridge, UK Postdoctoral training Wellcome Trust Sanger …
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Natural Prodcast Episode 20: Brian Bachmann
… DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell … this week is with Professor Brian Bachmann from Vanderbilt University’s Chemistry Department, where he is the PI of the … me call her Jackie, from Pharmacology and Toxicology at the University of Utah. Jackie was a grad student while I was a …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… Over the last year, we’ve been revisiting a number of notable achievements that showcase our collaborations and … O’Malley, a chemical and biological engineer at the University of California Santa Barbara. So plants don’t break down without …
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Accelerating Metagenomics Discoveries with Deep Learning
… On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and other … insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms … (Andrew Tritt of CRD and, independently, Ying Zhang of the University of Rhode Island), and to bin metagenomic contigs …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters … Thomas Mock, a marine microbiologist at the University of East Anglia, leads this effort to understand … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab) through the JGI …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter … 28, 2022, in Cell , a team led by researchers at Tel Aviv University in Israel, the National Center for Biotechnology … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab) describe a …
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Fishing for Novel Cellulose Degraders
… genomic approach to bioprospecting. The Science One of the most vital pieces of equipment for fly fishing is a boxful of lures. Designed … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Using a … Biotechnology Training Program (NIH 5 T32 GM008349) at the University of Wisconsin – Madison. This work was also …
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