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JGI Scientists Pen Genome Watch Articles
… Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … in environmental genomics by writing for the column Genome Watch in  Nature Reviews Microbiology .  The latest … Nature   Reviews column all started with an email in 2018.  Tanja Woyke , who leads the  Microbial Program at the …
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field … and maximize the benefit to society. Inspired by the Human Genome Project (HGP), and building upon the principles for … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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New and Improved: Eucalyptus Reference is Now Accessible
… An improved genome assembly to support targeted tree breeding for the …   The Science Researchers report a new reference genome for eucalyptus in the July edition of the journal G3 … tree, had a gene annotation completement level of 93.8%. The 2025 assembly has a gene annotation completement …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Annotation Group. Many of these bacterial and archaeal genome sequences have been generated using techniques that … ( IMG/M ) portal. As part of a comparative analysis, 824 new GEBA-Actino genome sequences were combined with …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for … most species do not grow easily in the lab. To access the genomes of uncultured  microbes , scientists usually employ … Amplification (PTA) yields a much higher completion, above 80% in most cases. The Impact PTA is a refined capability …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… Research Center One Health Ruhr (OHR), and the DOE Joint Genome Institute (JGI), Molecular Biophysics and Integrated … and ecosystem health. To facilitate in-depth discussions on future collaborations, an entire afternoon was dedicated to … the Molecular Foundry and the Advanced Light Source, future collaborative research projects were also intensively …
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Crysten Blaby-Haas
… user capability between the JGI and Molecular Foundry for genome-encoded biomaterial discovery, design, and … NIH NRSA Postdoctoral Fellowship (F32), 2012 – 2015 Bright Futures Academic Scholarship, 2002 – 2006 HCA Foundation … into the red algae and eukaryotic evolution from the genome of Porphyra umbilicalis (Bangiophyceae, Rhodophyta). …
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Ian Blaby
… 2019 Dr. Blaby heads the Biodesign Platform at the Joint Genome Institute, where he leads three groups focused on HTP … et al ., gRNA-SeqRET: a universal tool for targeted and genome-scale gRNA design and sequence extraction for … energy. Plant biotechnology journal . 14: 1, 22-28. 2016 Blaby et. al., Genome‐wide analysis on Chlamydomonas …
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Mike Sneddon
… in the Data Science and Informatics Department at the Joint Genome Institute. His team of engineers and scientists … C., Scannell, D., Serber, Z., Shock, J., Sneddon, M., and Yang, X. Metagenomic library and natural product discovery … platform. WO2021163637A1 , PCT application PCT/US2021/018050 (published 2021). Arkin, AP, et al. KBase: The United …
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Annual Genomics of Energy & Environment Meeting
… Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & …
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JGI@25: From Life at the Extremes to Editing Genomes
… has resulted in several papers, including one in 2018 on the discovery of miniature CRISPR-associated proteins … is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron … and metabolism through reconstruction of microbial genomes from the environment . Nature. 2004. 428, 37–43 …
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JGI Announces 2026 Functional Genomics Recipients
… Ritu Singh, Jiaqi Tan, Claire Willing Each year, the Joint Genome Institute (JGI) accepts proposals for … and omics capabilities to enhance understanding of gene and genome function. Understanding these functions gives …
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