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… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … climate has earned it a place on the JGI’s Flagship Plant Genome roster. Sorghum has an important feature in common … In 2009, the JGI sequenced and analyzed the first reference genome for Sorghum bicolor . Since then, 2,993 publications, …

… moss Ceratodon purpureus is a short plant with a complex genome . Now, high-quality reference genome sequences of the male and female plants, each … a single set of chromosomes, are available. The genome assemblies highlight the multiple advances in … The work conducted by the U.S. Department of Energy Joint Genome Institute was supported by the Office of Science of …

… Sorghum genome serves as a reference for the highly complex sugarcane genome . The Science Most species are diploids and have two … as a reference. The final sugarcane sequence generated is 382 Mb; 25,316 protein-coding gene models were predicted with … For the portion of the work conducted by the Joint Genome Institute and the Joint BioEnergy Institute, support …

… to keep processes running smoothly. As  reported August 26, 2021, in  Nature Communications , researchers led by Hal … Program at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … than were noted inside the cell. “One of the huge advantages of the cell-free system is that the cells are no …

… Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant … approaches. By mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & … virophage marker gene MCP, they were able to identify 44,221 total virophage partial sequences, including over 28,000 …

… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of … that “taught” a computer how to classify 101 representative genomes of Dothideomycetes, the largest class of fungi, by … (green). (From Haridas S et al.  Studies in Mycology , 2020.) Using whole genome data from newly sequenced genomes, …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … crop. In 2018, the JGI had sequenced and assembled the genomes of two varieties of a close relative and model … high-quality reference sequence of the complex switchgrass genome. The reference genome built off more than a decade of …

… decades of technological development, dozens of reference genomes and thousands of resequenced sorghum varieties, a … traits that let this biomass powerhouse thrive. Within its genome, Sorghum bicolor holds keys to drought and flood … to build this pangenome, including a reassembly of the BTx623 reference genome. This cultivar has been the reference …

… a list of researchers whose proposals were accepted for 2025. Utilizing the JGI’s resources, these researchers will … call; the next deadline for proposal submission is Sept. 9, 2025, for inclusion in the November 2025 review. You can …

… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also holds a joint … known as polyploidy. The multiple copies arise from past genome duplication, which occurs in two basic ways. In …