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… For the first time in several years, the DOE Joint Genome Institute hosted several UC Merced students this past … and Exploring Novel BGC Detection Techniques on Fungal Genomes Video Transcript: Emerald Nash : What I’m working on … that I got to do a project involving over 12,000 fungal genomes was just really, really exciting for me and learning …

… recovered and identified from environmental samples (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science of …

… ago, a team discovered a group of viruses that had in their genomes a surprising tool: a “diversity generating … by scientists at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … sampled all at once from the same environment, called metagenomes. Why? Simon Roux, who led the research team and is …

… Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant … Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant … approaches. By mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial Genomes & …

… address of the 2023 JGI Annual Meeting. As the JGI’s Metagenome Science Program Head, Emiley Eloe-Fadrosh, introduced … even delight. He qualified his talk title as he took the stage, saying, “to me, the wild adjective there is redundant, … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of … that “taught” a computer how to classify 101 representative genomes of Dothideomycetes, the largest class of fungi, by … plant pathogens known to infect most major food crops and feedstocks for biomass and biofuel production. Learning …

… and other traits that make it a viable candidate bioenergy feedstock crop. In 2018, the JGI had sequenced and assembled the genomes of two varieties of a close relative and model … high-quality reference sequence of the complex switchgrass genome. The reference genome built off more than a decade of …

… decades of technological development, dozens of reference genomes and thousands of resequenced sorghum varieties, a … traits that let this biomass powerhouse thrive. Within its genome, Sorghum bicolor holds keys to drought and flood … on sorghum has focused on producing high-quality reference genomes. By cataloguing a genome sequence for a line of …

… 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also holds a joint … known as polyploidy. The multiple copies arise from past genome duplication, which occurs in two basic ways. In “autopolyploids”, genome duplication occurs within a single species. By …